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Common-sense approaches to sharing tabular data alongside publication
Numerous arguments strongly support the practice of open science, which offers several societal and individual benefits. For individual researchers, sharing research artifacts such as data can increase trust and transparency, improve the reproducibility of one's own work, and catalyze new colla...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8672137/ https://www.ncbi.nlm.nih.gov/pubmed/34950899 http://dx.doi.org/10.1016/j.patter.2021.100368 |
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author | Tierney, Nicholas J. Ram, Karthik |
author_facet | Tierney, Nicholas J. Ram, Karthik |
author_sort | Tierney, Nicholas J. |
collection | PubMed |
description | Numerous arguments strongly support the practice of open science, which offers several societal and individual benefits. For individual researchers, sharing research artifacts such as data can increase trust and transparency, improve the reproducibility of one's own work, and catalyze new collaborations. Despite a general appreciation of the benefits of data sharing, research data are often only available to the original investigators. For data that are shared, lack of useful metadata and documentation make them challenging to reuse. In this paper, we argue that a lack of incentives and infrastructure for making data useful is the biggest barrier to creating a culture of widespread data sharing. We compare data with code, examine computational environments in the context of their ability to facilitate the reproducibility of research, provide some practical guidance on how one can improve the chances of their data being reusable, and partially bridge the incentive gap. While previous papers have focused on describing ideal best practices for data and code, we focus on common-sense ideas for sharing tabular data for a target audience of academics working in data science adjacent fields who are about to submit for publication. |
format | Online Article Text |
id | pubmed-8672137 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-86721372021-12-22 Common-sense approaches to sharing tabular data alongside publication Tierney, Nicholas J. Ram, Karthik Patterns (N Y) Perspective Numerous arguments strongly support the practice of open science, which offers several societal and individual benefits. For individual researchers, sharing research artifacts such as data can increase trust and transparency, improve the reproducibility of one's own work, and catalyze new collaborations. Despite a general appreciation of the benefits of data sharing, research data are often only available to the original investigators. For data that are shared, lack of useful metadata and documentation make them challenging to reuse. In this paper, we argue that a lack of incentives and infrastructure for making data useful is the biggest barrier to creating a culture of widespread data sharing. We compare data with code, examine computational environments in the context of their ability to facilitate the reproducibility of research, provide some practical guidance on how one can improve the chances of their data being reusable, and partially bridge the incentive gap. While previous papers have focused on describing ideal best practices for data and code, we focus on common-sense ideas for sharing tabular data for a target audience of academics working in data science adjacent fields who are about to submit for publication. Elsevier 2021-12-10 /pmc/articles/PMC8672137/ /pubmed/34950899 http://dx.doi.org/10.1016/j.patter.2021.100368 Text en © 2021 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Perspective Tierney, Nicholas J. Ram, Karthik Common-sense approaches to sharing tabular data alongside publication |
title | Common-sense approaches to sharing tabular data alongside publication |
title_full | Common-sense approaches to sharing tabular data alongside publication |
title_fullStr | Common-sense approaches to sharing tabular data alongside publication |
title_full_unstemmed | Common-sense approaches to sharing tabular data alongside publication |
title_short | Common-sense approaches to sharing tabular data alongside publication |
title_sort | common-sense approaches to sharing tabular data alongside publication |
topic | Perspective |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8672137/ https://www.ncbi.nlm.nih.gov/pubmed/34950899 http://dx.doi.org/10.1016/j.patter.2021.100368 |
work_keys_str_mv | AT tierneynicholasj commonsenseapproachestosharingtabulardataalongsidepublication AT ramkarthik commonsenseapproachestosharingtabulardataalongsidepublication |