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Complete genome sequence of Bacillus coagulans CACC834 isolated from canine

Bacillus coagulans CACC 834 was isolated from canine feces, and its potential probiotic properties were characterized by functional genome analysis. Whole-genome sequencing of B. coagulans CACC 834 was performed using the PacBio RSII platforms. The complete genome assembly consisted of one circular...

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Autores principales: Kim, Jung-Ae, Kim, Dae-Hyuk, Kim, Yangseon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society of Animal Sciences and Technology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8672255/
https://www.ncbi.nlm.nih.gov/pubmed/34957459
http://dx.doi.org/10.5187/jast.2021.e108
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author Kim, Jung-Ae
Kim, Dae-Hyuk
Kim, Yangseon
author_facet Kim, Jung-Ae
Kim, Dae-Hyuk
Kim, Yangseon
author_sort Kim, Jung-Ae
collection PubMed
description Bacillus coagulans CACC 834 was isolated from canine feces, and its potential probiotic properties were characterized by functional genome analysis. Whole-genome sequencing of B. coagulans CACC 834 was performed using the PacBio RSII platforms. The complete genome assembly consisted of one circular chromosome (3.1 Mb) with guanine (G) + cytosine (C) content of 47.1%. Annotation revealed 3,181 protein-coding sequences (CDSs), 30 rRNAs, and 83 tRNAs. Gene associated 11% of the genes were involved in replication, recombination, and repair. We also annotated various stress-related, acid resistance, bile salt resistance and adhesion-related domains in this strain, which likely provide support in exerting probiotic action by survival under gastrointestinal tract. These results add to our comprehensive understanding of B. coagulans and suggest potential mammal-related industrial applications.
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spelling pubmed-86722552021-12-23 Complete genome sequence of Bacillus coagulans CACC834 isolated from canine Kim, Jung-Ae Kim, Dae-Hyuk Kim, Yangseon J Anim Sci Technol Research Article Bacillus coagulans CACC 834 was isolated from canine feces, and its potential probiotic properties were characterized by functional genome analysis. Whole-genome sequencing of B. coagulans CACC 834 was performed using the PacBio RSII platforms. The complete genome assembly consisted of one circular chromosome (3.1 Mb) with guanine (G) + cytosine (C) content of 47.1%. Annotation revealed 3,181 protein-coding sequences (CDSs), 30 rRNAs, and 83 tRNAs. Gene associated 11% of the genes were involved in replication, recombination, and repair. We also annotated various stress-related, acid resistance, bile salt resistance and adhesion-related domains in this strain, which likely provide support in exerting probiotic action by survival under gastrointestinal tract. These results add to our comprehensive understanding of B. coagulans and suggest potential mammal-related industrial applications. Korean Society of Animal Sciences and Technology 2021-11 2021-11-30 /pmc/articles/PMC8672255/ /pubmed/34957459 http://dx.doi.org/10.5187/jast.2021.e108 Text en © Copyright 2021 Korean Society of Animal Science and Technology https://creativecommons.org/licenses/by-nc/4.0/This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Kim, Jung-Ae
Kim, Dae-Hyuk
Kim, Yangseon
Complete genome sequence of Bacillus coagulans CACC834 isolated from canine
title Complete genome sequence of Bacillus coagulans CACC834 isolated from canine
title_full Complete genome sequence of Bacillus coagulans CACC834 isolated from canine
title_fullStr Complete genome sequence of Bacillus coagulans CACC834 isolated from canine
title_full_unstemmed Complete genome sequence of Bacillus coagulans CACC834 isolated from canine
title_short Complete genome sequence of Bacillus coagulans CACC834 isolated from canine
title_sort complete genome sequence of bacillus coagulans cacc834 isolated from canine
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8672255/
https://www.ncbi.nlm.nih.gov/pubmed/34957459
http://dx.doi.org/10.5187/jast.2021.e108
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