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Complete genome sequence of Bacillus coagulans CACC834 isolated from canine
Bacillus coagulans CACC 834 was isolated from canine feces, and its potential probiotic properties were characterized by functional genome analysis. Whole-genome sequencing of B. coagulans CACC 834 was performed using the PacBio RSII platforms. The complete genome assembly consisted of one circular...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Korean Society of Animal Sciences and Technology
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8672255/ https://www.ncbi.nlm.nih.gov/pubmed/34957459 http://dx.doi.org/10.5187/jast.2021.e108 |
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author | Kim, Jung-Ae Kim, Dae-Hyuk Kim, Yangseon |
author_facet | Kim, Jung-Ae Kim, Dae-Hyuk Kim, Yangseon |
author_sort | Kim, Jung-Ae |
collection | PubMed |
description | Bacillus coagulans CACC 834 was isolated from canine feces, and its potential probiotic properties were characterized by functional genome analysis. Whole-genome sequencing of B. coagulans CACC 834 was performed using the PacBio RSII platforms. The complete genome assembly consisted of one circular chromosome (3.1 Mb) with guanine (G) + cytosine (C) content of 47.1%. Annotation revealed 3,181 protein-coding sequences (CDSs), 30 rRNAs, and 83 tRNAs. Gene associated 11% of the genes were involved in replication, recombination, and repair. We also annotated various stress-related, acid resistance, bile salt resistance and adhesion-related domains in this strain, which likely provide support in exerting probiotic action by survival under gastrointestinal tract. These results add to our comprehensive understanding of B. coagulans and suggest potential mammal-related industrial applications. |
format | Online Article Text |
id | pubmed-8672255 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Korean Society of Animal Sciences and Technology |
record_format | MEDLINE/PubMed |
spelling | pubmed-86722552021-12-23 Complete genome sequence of Bacillus coagulans CACC834 isolated from canine Kim, Jung-Ae Kim, Dae-Hyuk Kim, Yangseon J Anim Sci Technol Research Article Bacillus coagulans CACC 834 was isolated from canine feces, and its potential probiotic properties were characterized by functional genome analysis. Whole-genome sequencing of B. coagulans CACC 834 was performed using the PacBio RSII platforms. The complete genome assembly consisted of one circular chromosome (3.1 Mb) with guanine (G) + cytosine (C) content of 47.1%. Annotation revealed 3,181 protein-coding sequences (CDSs), 30 rRNAs, and 83 tRNAs. Gene associated 11% of the genes were involved in replication, recombination, and repair. We also annotated various stress-related, acid resistance, bile salt resistance and adhesion-related domains in this strain, which likely provide support in exerting probiotic action by survival under gastrointestinal tract. These results add to our comprehensive understanding of B. coagulans and suggest potential mammal-related industrial applications. Korean Society of Animal Sciences and Technology 2021-11 2021-11-30 /pmc/articles/PMC8672255/ /pubmed/34957459 http://dx.doi.org/10.5187/jast.2021.e108 Text en © Copyright 2021 Korean Society of Animal Science and Technology https://creativecommons.org/licenses/by-nc/4.0/This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Kim, Jung-Ae Kim, Dae-Hyuk Kim, Yangseon Complete genome sequence of Bacillus coagulans CACC834 isolated from canine |
title | Complete genome sequence of Bacillus coagulans
CACC834 isolated from canine |
title_full | Complete genome sequence of Bacillus coagulans
CACC834 isolated from canine |
title_fullStr | Complete genome sequence of Bacillus coagulans
CACC834 isolated from canine |
title_full_unstemmed | Complete genome sequence of Bacillus coagulans
CACC834 isolated from canine |
title_short | Complete genome sequence of Bacillus coagulans
CACC834 isolated from canine |
title_sort | complete genome sequence of bacillus coagulans
cacc834 isolated from canine |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8672255/ https://www.ncbi.nlm.nih.gov/pubmed/34957459 http://dx.doi.org/10.5187/jast.2021.e108 |
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