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Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods

The Continuous Automated Model EvaluatiOn (CAMEO) platform complements the biennial CASP experiment by conducting fully automated blind evaluations of three‐dimensional protein prediction servers based on the weekly prerelease of sequences of those structures, which are going to be published in the...

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Detalles Bibliográficos
Autores principales: Robin, Xavier, Haas, Juergen, Gumienny, Rafal, Smolinski, Anna, Tauriello, Gerardo, Schwede, Torsten
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8673552/
https://www.ncbi.nlm.nih.gov/pubmed/34387007
http://dx.doi.org/10.1002/prot.26213
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author Robin, Xavier
Haas, Juergen
Gumienny, Rafal
Smolinski, Anna
Tauriello, Gerardo
Schwede, Torsten
author_facet Robin, Xavier
Haas, Juergen
Gumienny, Rafal
Smolinski, Anna
Tauriello, Gerardo
Schwede, Torsten
author_sort Robin, Xavier
collection PubMed
description The Continuous Automated Model EvaluatiOn (CAMEO) platform complements the biennial CASP experiment by conducting fully automated blind evaluations of three‐dimensional protein prediction servers based on the weekly prerelease of sequences of those structures, which are going to be published in the upcoming release of the Protein Data Bank. While in CASP14, significant success was observed in predicting the structures of individual protein chains with high accuracy, significant challenges remain in correctly predicting the structures of complexes. By implementing fully automated evaluation of predictions for protein–protein complexes, as well as for proteins in complex with ligands, peptides, nucleic acids, or proteins containing noncanonical amino acid residues, CAMEO will assist new developments in those challenging areas of active research.
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spelling pubmed-86735522022-10-14 Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods Robin, Xavier Haas, Juergen Gumienny, Rafal Smolinski, Anna Tauriello, Gerardo Schwede, Torsten Proteins Research Articles The Continuous Automated Model EvaluatiOn (CAMEO) platform complements the biennial CASP experiment by conducting fully automated blind evaluations of three‐dimensional protein prediction servers based on the weekly prerelease of sequences of those structures, which are going to be published in the upcoming release of the Protein Data Bank. While in CASP14, significant success was observed in predicting the structures of individual protein chains with high accuracy, significant challenges remain in correctly predicting the structures of complexes. By implementing fully automated evaluation of predictions for protein–protein complexes, as well as for proteins in complex with ligands, peptides, nucleic acids, or proteins containing noncanonical amino acid residues, CAMEO will assist new developments in those challenging areas of active research. John Wiley & Sons, Inc. 2021-08-19 2021-12 /pmc/articles/PMC8673552/ /pubmed/34387007 http://dx.doi.org/10.1002/prot.26213 Text en © 2021 The Authors. Proteins: Structure, Function, and Bioinformatics published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Robin, Xavier
Haas, Juergen
Gumienny, Rafal
Smolinski, Anna
Tauriello, Gerardo
Schwede, Torsten
Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods
title Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods
title_full Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods
title_fullStr Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods
title_full_unstemmed Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods
title_short Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods
title_sort continuous automated model evaluation (cameo)—perspectives on the future of fully automated evaluation of structure prediction methods
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8673552/
https://www.ncbi.nlm.nih.gov/pubmed/34387007
http://dx.doi.org/10.1002/prot.26213
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