Cargando…
Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods
The Continuous Automated Model EvaluatiOn (CAMEO) platform complements the biennial CASP experiment by conducting fully automated blind evaluations of three‐dimensional protein prediction servers based on the weekly prerelease of sequences of those structures, which are going to be published in the...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8673552/ https://www.ncbi.nlm.nih.gov/pubmed/34387007 http://dx.doi.org/10.1002/prot.26213 |
_version_ | 1784615476399177728 |
---|---|
author | Robin, Xavier Haas, Juergen Gumienny, Rafal Smolinski, Anna Tauriello, Gerardo Schwede, Torsten |
author_facet | Robin, Xavier Haas, Juergen Gumienny, Rafal Smolinski, Anna Tauriello, Gerardo Schwede, Torsten |
author_sort | Robin, Xavier |
collection | PubMed |
description | The Continuous Automated Model EvaluatiOn (CAMEO) platform complements the biennial CASP experiment by conducting fully automated blind evaluations of three‐dimensional protein prediction servers based on the weekly prerelease of sequences of those structures, which are going to be published in the upcoming release of the Protein Data Bank. While in CASP14, significant success was observed in predicting the structures of individual protein chains with high accuracy, significant challenges remain in correctly predicting the structures of complexes. By implementing fully automated evaluation of predictions for protein–protein complexes, as well as for proteins in complex with ligands, peptides, nucleic acids, or proteins containing noncanonical amino acid residues, CAMEO will assist new developments in those challenging areas of active research. |
format | Online Article Text |
id | pubmed-8673552 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-86735522022-10-14 Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods Robin, Xavier Haas, Juergen Gumienny, Rafal Smolinski, Anna Tauriello, Gerardo Schwede, Torsten Proteins Research Articles The Continuous Automated Model EvaluatiOn (CAMEO) platform complements the biennial CASP experiment by conducting fully automated blind evaluations of three‐dimensional protein prediction servers based on the weekly prerelease of sequences of those structures, which are going to be published in the upcoming release of the Protein Data Bank. While in CASP14, significant success was observed in predicting the structures of individual protein chains with high accuracy, significant challenges remain in correctly predicting the structures of complexes. By implementing fully automated evaluation of predictions for protein–protein complexes, as well as for proteins in complex with ligands, peptides, nucleic acids, or proteins containing noncanonical amino acid residues, CAMEO will assist new developments in those challenging areas of active research. John Wiley & Sons, Inc. 2021-08-19 2021-12 /pmc/articles/PMC8673552/ /pubmed/34387007 http://dx.doi.org/10.1002/prot.26213 Text en © 2021 The Authors. Proteins: Structure, Function, and Bioinformatics published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Robin, Xavier Haas, Juergen Gumienny, Rafal Smolinski, Anna Tauriello, Gerardo Schwede, Torsten Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods |
title | Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods |
title_full | Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods |
title_fullStr | Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods |
title_full_unstemmed | Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods |
title_short | Continuous Automated Model EvaluatiOn (CAMEO)—Perspectives on the future of fully automated evaluation of structure prediction methods |
title_sort | continuous automated model evaluation (cameo)—perspectives on the future of fully automated evaluation of structure prediction methods |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8673552/ https://www.ncbi.nlm.nih.gov/pubmed/34387007 http://dx.doi.org/10.1002/prot.26213 |
work_keys_str_mv | AT robinxavier continuousautomatedmodelevaluationcameoperspectivesonthefutureoffullyautomatedevaluationofstructurepredictionmethods AT haasjuergen continuousautomatedmodelevaluationcameoperspectivesonthefutureoffullyautomatedevaluationofstructurepredictionmethods AT gumiennyrafal continuousautomatedmodelevaluationcameoperspectivesonthefutureoffullyautomatedevaluationofstructurepredictionmethods AT smolinskianna continuousautomatedmodelevaluationcameoperspectivesonthefutureoffullyautomatedevaluationofstructurepredictionmethods AT tauriellogerardo continuousautomatedmodelevaluationcameoperspectivesonthefutureoffullyautomatedevaluationofstructurepredictionmethods AT schwedetorsten continuousautomatedmodelevaluationcameoperspectivesonthefutureoffullyautomatedevaluationofstructurepredictionmethods |