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Harmony COVID-19: A ready-to-use kit, low-cost detector, and smartphone app for point-of-care SARS-CoV-2 RNA detection

RNA amplification tests sensitively detect severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection, but their complexity and cost are prohibitive for expanding coronavirus disease 2019 (COVID-19) testing. We developed “Harmony COVID-19,” a point-of-care test using inexpensive consumab...

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Autores principales: Panpradist, Nuttada, Kline, Enos C., Atkinson, Robert G., Roller, Michael, Wang, Qin, Hull, Ian T., Kotnik, Jack H., Oreskovic, Amy K., Bennett, Crissa, Leon, Daniel, Lyon, Victoria, Gilligan-Steinberg, Shane D., Han, Peter D., Drain, Paul K., Starita, Lea M., Thompson, Matthew J., Lutz, Barry R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8673764/
https://www.ncbi.nlm.nih.gov/pubmed/34910507
http://dx.doi.org/10.1126/sciadv.abj1281
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author Panpradist, Nuttada
Kline, Enos C.
Atkinson, Robert G.
Roller, Michael
Wang, Qin
Hull, Ian T.
Kotnik, Jack H.
Oreskovic, Amy K.
Bennett, Crissa
Leon, Daniel
Lyon, Victoria
Gilligan-Steinberg, Shane D.
Han, Peter D.
Drain, Paul K.
Starita, Lea M.
Thompson, Matthew J.
Lutz, Barry R.
author_facet Panpradist, Nuttada
Kline, Enos C.
Atkinson, Robert G.
Roller, Michael
Wang, Qin
Hull, Ian T.
Kotnik, Jack H.
Oreskovic, Amy K.
Bennett, Crissa
Leon, Daniel
Lyon, Victoria
Gilligan-Steinberg, Shane D.
Han, Peter D.
Drain, Paul K.
Starita, Lea M.
Thompson, Matthew J.
Lutz, Barry R.
author_sort Panpradist, Nuttada
collection PubMed
description RNA amplification tests sensitively detect severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection, but their complexity and cost are prohibitive for expanding coronavirus disease 2019 (COVID-19) testing. We developed “Harmony COVID-19,” a point-of-care test using inexpensive consumables, ready-to-use reagents, and a simple device. Our ready-to-use, multiplexed reverse transcription, loop-mediated isothermal amplification (RT-LAMP) can detect down to 0.38 SARS-CoV-2 RNA copies/μl and can report in 17 min for high–viral load samples (5000 copies/μl). Harmony detected 97 or 83% of contrived samples with ≥0.5 viral particles/μl in nasal matrix or saliva, respectively. Evaluation in clinical nasal specimens (n = 101) showed 100% detection of RNA extracted from specimens with ≥0.5 SARS-CoV-2 RNA copies/μl, with 100% specificity in specimens positive for other respiratory pathogens. Extraction-free analysis (n = 29) had 95% success in specimens with ≥1 RNA copies/μl. Usability testing performed first time by health care workers showed 95% accuracy.
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spelling pubmed-86737642021-12-28 Harmony COVID-19: A ready-to-use kit, low-cost detector, and smartphone app for point-of-care SARS-CoV-2 RNA detection Panpradist, Nuttada Kline, Enos C. Atkinson, Robert G. Roller, Michael Wang, Qin Hull, Ian T. Kotnik, Jack H. Oreskovic, Amy K. Bennett, Crissa Leon, Daniel Lyon, Victoria Gilligan-Steinberg, Shane D. Han, Peter D. Drain, Paul K. Starita, Lea M. Thompson, Matthew J. Lutz, Barry R. Sci Adv Biomedicine and Life Sciences RNA amplification tests sensitively detect severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection, but their complexity and cost are prohibitive for expanding coronavirus disease 2019 (COVID-19) testing. We developed “Harmony COVID-19,” a point-of-care test using inexpensive consumables, ready-to-use reagents, and a simple device. Our ready-to-use, multiplexed reverse transcription, loop-mediated isothermal amplification (RT-LAMP) can detect down to 0.38 SARS-CoV-2 RNA copies/μl and can report in 17 min for high–viral load samples (5000 copies/μl). Harmony detected 97 or 83% of contrived samples with ≥0.5 viral particles/μl in nasal matrix or saliva, respectively. Evaluation in clinical nasal specimens (n = 101) showed 100% detection of RNA extracted from specimens with ≥0.5 SARS-CoV-2 RNA copies/μl, with 100% specificity in specimens positive for other respiratory pathogens. Extraction-free analysis (n = 29) had 95% success in specimens with ≥1 RNA copies/μl. Usability testing performed first time by health care workers showed 95% accuracy. American Association for the Advancement of Science 2021-12-15 /pmc/articles/PMC8673764/ /pubmed/34910507 http://dx.doi.org/10.1126/sciadv.abj1281 Text en Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY). https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution license (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Biomedicine and Life Sciences
Panpradist, Nuttada
Kline, Enos C.
Atkinson, Robert G.
Roller, Michael
Wang, Qin
Hull, Ian T.
Kotnik, Jack H.
Oreskovic, Amy K.
Bennett, Crissa
Leon, Daniel
Lyon, Victoria
Gilligan-Steinberg, Shane D.
Han, Peter D.
Drain, Paul K.
Starita, Lea M.
Thompson, Matthew J.
Lutz, Barry R.
Harmony COVID-19: A ready-to-use kit, low-cost detector, and smartphone app for point-of-care SARS-CoV-2 RNA detection
title Harmony COVID-19: A ready-to-use kit, low-cost detector, and smartphone app for point-of-care SARS-CoV-2 RNA detection
title_full Harmony COVID-19: A ready-to-use kit, low-cost detector, and smartphone app for point-of-care SARS-CoV-2 RNA detection
title_fullStr Harmony COVID-19: A ready-to-use kit, low-cost detector, and smartphone app for point-of-care SARS-CoV-2 RNA detection
title_full_unstemmed Harmony COVID-19: A ready-to-use kit, low-cost detector, and smartphone app for point-of-care SARS-CoV-2 RNA detection
title_short Harmony COVID-19: A ready-to-use kit, low-cost detector, and smartphone app for point-of-care SARS-CoV-2 RNA detection
title_sort harmony covid-19: a ready-to-use kit, low-cost detector, and smartphone app for point-of-care sars-cov-2 rna detection
topic Biomedicine and Life Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8673764/
https://www.ncbi.nlm.nih.gov/pubmed/34910507
http://dx.doi.org/10.1126/sciadv.abj1281
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