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SwissPK(cdw) – A clinical data warehouse for the optimization of pediatric dosing regimens

Clinical trials have been performed mainly in adults and accordingly the necessary information is lacking for pediatric patients, especially regarding dosage recommendation for approved drugs. This gap in information could be filled with results from pharmacokinetic (PK) modeling, based on data coll...

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Autores principales: Goers, Roland, Coman Schmid, Diana, Jäggi, Vera F., Paioni, Paolo, Okoniewski, Michal J., Parker, Althea, Bangerter, Beat, Georgakopoulou, Sofia, Sengstag, Thierry, Bielicki, Julia, Tilen, Romy, Vermeul, Swen, Krämer, Stefanie D., Berger, Christoph, Rinn, Bernd, Meyer zu Schwabedissen, Henriette E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8673996/
https://www.ncbi.nlm.nih.gov/pubmed/34729953
http://dx.doi.org/10.1002/psp4.12723
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author Goers, Roland
Coman Schmid, Diana
Jäggi, Vera F.
Paioni, Paolo
Okoniewski, Michal J.
Parker, Althea
Bangerter, Beat
Georgakopoulou, Sofia
Sengstag, Thierry
Bielicki, Julia
Tilen, Romy
Vermeul, Swen
Krämer, Stefanie D.
Berger, Christoph
Rinn, Bernd
Meyer zu Schwabedissen, Henriette E.
author_facet Goers, Roland
Coman Schmid, Diana
Jäggi, Vera F.
Paioni, Paolo
Okoniewski, Michal J.
Parker, Althea
Bangerter, Beat
Georgakopoulou, Sofia
Sengstag, Thierry
Bielicki, Julia
Tilen, Romy
Vermeul, Swen
Krämer, Stefanie D.
Berger, Christoph
Rinn, Bernd
Meyer zu Schwabedissen, Henriette E.
author_sort Goers, Roland
collection PubMed
description Clinical trials have been performed mainly in adults and accordingly the necessary information is lacking for pediatric patients, especially regarding dosage recommendation for approved drugs. This gap in information could be filled with results from pharmacokinetic (PK) modeling, based on data collected in daily clinical routine. In order to make this data accessible and usable for research, the Swiss Pharmacokinetics Clinical Data Warehouse (SwissPK(cdw)) project has been set up, including a clinical data warehouse (CDW) and the regulatory framework for data transfer and use within. Embedded into the secure BioMedIT network, the CDW can connect to various data providers and researchers in order to collaborate on the data securely. Due to its modularity, partially containerized deployment and open‐source software, each of the components can be extended, modified, and re‐used for similar projects that require integrated data management, data analysis, and web tools in a secure scientific data and information technology (IT) environment. Here, we describe a collaborative and interprofessional effort to implement the aforementioned infrastructure between several partners from medical health care and academia. Furthermore, we describe a real‐world use case where blood samples from pediatric patients were analyzed for the presence of genetic polymorphisms and the results were aggregated and further analyzed together with the health‐related patient data in the SwissPK(cdw).
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spelling pubmed-86739962021-12-22 SwissPK(cdw) – A clinical data warehouse for the optimization of pediatric dosing regimens Goers, Roland Coman Schmid, Diana Jäggi, Vera F. Paioni, Paolo Okoniewski, Michal J. Parker, Althea Bangerter, Beat Georgakopoulou, Sofia Sengstag, Thierry Bielicki, Julia Tilen, Romy Vermeul, Swen Krämer, Stefanie D. Berger, Christoph Rinn, Bernd Meyer zu Schwabedissen, Henriette E. CPT Pharmacometrics Syst Pharmacol Research Clinical trials have been performed mainly in adults and accordingly the necessary information is lacking for pediatric patients, especially regarding dosage recommendation for approved drugs. This gap in information could be filled with results from pharmacokinetic (PK) modeling, based on data collected in daily clinical routine. In order to make this data accessible and usable for research, the Swiss Pharmacokinetics Clinical Data Warehouse (SwissPK(cdw)) project has been set up, including a clinical data warehouse (CDW) and the regulatory framework for data transfer and use within. Embedded into the secure BioMedIT network, the CDW can connect to various data providers and researchers in order to collaborate on the data securely. Due to its modularity, partially containerized deployment and open‐source software, each of the components can be extended, modified, and re‐used for similar projects that require integrated data management, data analysis, and web tools in a secure scientific data and information technology (IT) environment. Here, we describe a collaborative and interprofessional effort to implement the aforementioned infrastructure between several partners from medical health care and academia. Furthermore, we describe a real‐world use case where blood samples from pediatric patients were analyzed for the presence of genetic polymorphisms and the results were aggregated and further analyzed together with the health‐related patient data in the SwissPK(cdw). John Wiley and Sons Inc. 2021-11-02 2021-12 /pmc/articles/PMC8673996/ /pubmed/34729953 http://dx.doi.org/10.1002/psp4.12723 Text en © 2021 The Authors. CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals LLC on behalf of American Society for Clinical Pharmacology and Therapeutics. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Research
Goers, Roland
Coman Schmid, Diana
Jäggi, Vera F.
Paioni, Paolo
Okoniewski, Michal J.
Parker, Althea
Bangerter, Beat
Georgakopoulou, Sofia
Sengstag, Thierry
Bielicki, Julia
Tilen, Romy
Vermeul, Swen
Krämer, Stefanie D.
Berger, Christoph
Rinn, Bernd
Meyer zu Schwabedissen, Henriette E.
SwissPK(cdw) – A clinical data warehouse for the optimization of pediatric dosing regimens
title SwissPK(cdw) – A clinical data warehouse for the optimization of pediatric dosing regimens
title_full SwissPK(cdw) – A clinical data warehouse for the optimization of pediatric dosing regimens
title_fullStr SwissPK(cdw) – A clinical data warehouse for the optimization of pediatric dosing regimens
title_full_unstemmed SwissPK(cdw) – A clinical data warehouse for the optimization of pediatric dosing regimens
title_short SwissPK(cdw) – A clinical data warehouse for the optimization of pediatric dosing regimens
title_sort swisspk(cdw) – a clinical data warehouse for the optimization of pediatric dosing regimens
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8673996/
https://www.ncbi.nlm.nih.gov/pubmed/34729953
http://dx.doi.org/10.1002/psp4.12723
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