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Prediction across healthcare settings: a case study in predicting emergency department disposition
Several approaches exist today for developing predictive models across multiple clinical sites, yet there is a lack of comparative data on their performance, especially within the context of EHR-based prediction models. We set out to provide a framework for prediction across healthcare settings. As...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8674364/ https://www.ncbi.nlm.nih.gov/pubmed/34912043 http://dx.doi.org/10.1038/s41746-021-00537-x |
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author | Barak-Corren, Yuval Chaudhari, Pradip Perniciaro, Jessica Waltzman, Mark Fine, Andrew M. Reis, Ben Y. |
author_facet | Barak-Corren, Yuval Chaudhari, Pradip Perniciaro, Jessica Waltzman, Mark Fine, Andrew M. Reis, Ben Y. |
author_sort | Barak-Corren, Yuval |
collection | PubMed |
description | Several approaches exist today for developing predictive models across multiple clinical sites, yet there is a lack of comparative data on their performance, especially within the context of EHR-based prediction models. We set out to provide a framework for prediction across healthcare settings. As a case study, we examined an ED disposition prediction model across three geographically and demographically diverse sites. We conducted a 1-year retrospective study, including all visits in which the outcome was either discharge-to-home or hospitalization. Four modeling approaches were compared: a ready-made model trained at one site and validated at other sites, a centralized uniform model incorporating data from all sites, multiple site-specific models, and a hybrid approach of a ready-made model re-calibrated using site-specific data. Predictions were performed using XGBoost. The study included 288,962 visits with an overall admission rate of 16.8% (7.9–26.9%). Some risk factors for admission were prominent across all sites (e.g., high-acuity triage emergency severity index score, high prior admissions rate), while others were prominent at only some sites (multiple lab tests ordered at the pediatric sites, early use of ECG at the adult site). The XGBoost model achieved its best performance using the uniform and site-specific approaches (AUC = 0.9–0.93), followed by the calibrated-model approach (AUC = 0.87–0.92), and the ready-made approach (AUC = 0.62–0.85). Our results show that site-specific customization is a key driver of predictive model performance. |
format | Online Article Text |
id | pubmed-8674364 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-86743642022-01-04 Prediction across healthcare settings: a case study in predicting emergency department disposition Barak-Corren, Yuval Chaudhari, Pradip Perniciaro, Jessica Waltzman, Mark Fine, Andrew M. Reis, Ben Y. NPJ Digit Med Article Several approaches exist today for developing predictive models across multiple clinical sites, yet there is a lack of comparative data on their performance, especially within the context of EHR-based prediction models. We set out to provide a framework for prediction across healthcare settings. As a case study, we examined an ED disposition prediction model across three geographically and demographically diverse sites. We conducted a 1-year retrospective study, including all visits in which the outcome was either discharge-to-home or hospitalization. Four modeling approaches were compared: a ready-made model trained at one site and validated at other sites, a centralized uniform model incorporating data from all sites, multiple site-specific models, and a hybrid approach of a ready-made model re-calibrated using site-specific data. Predictions were performed using XGBoost. The study included 288,962 visits with an overall admission rate of 16.8% (7.9–26.9%). Some risk factors for admission were prominent across all sites (e.g., high-acuity triage emergency severity index score, high prior admissions rate), while others were prominent at only some sites (multiple lab tests ordered at the pediatric sites, early use of ECG at the adult site). The XGBoost model achieved its best performance using the uniform and site-specific approaches (AUC = 0.9–0.93), followed by the calibrated-model approach (AUC = 0.87–0.92), and the ready-made approach (AUC = 0.62–0.85). Our results show that site-specific customization is a key driver of predictive model performance. Nature Publishing Group UK 2021-12-15 /pmc/articles/PMC8674364/ /pubmed/34912043 http://dx.doi.org/10.1038/s41746-021-00537-x Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Barak-Corren, Yuval Chaudhari, Pradip Perniciaro, Jessica Waltzman, Mark Fine, Andrew M. Reis, Ben Y. Prediction across healthcare settings: a case study in predicting emergency department disposition |
title | Prediction across healthcare settings: a case study in predicting emergency department disposition |
title_full | Prediction across healthcare settings: a case study in predicting emergency department disposition |
title_fullStr | Prediction across healthcare settings: a case study in predicting emergency department disposition |
title_full_unstemmed | Prediction across healthcare settings: a case study in predicting emergency department disposition |
title_short | Prediction across healthcare settings: a case study in predicting emergency department disposition |
title_sort | prediction across healthcare settings: a case study in predicting emergency department disposition |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8674364/ https://www.ncbi.nlm.nih.gov/pubmed/34912043 http://dx.doi.org/10.1038/s41746-021-00537-x |
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