Cargando…

A novel unsupervised approach based on the hidden features of Deep Denoising Autoencoders for COVID-19 disease detection

Chest imaging can represent a powerful tool for detecting the Coronavirus disease 2019 (COVID-19). Among the available technologies, the chest Computed Tomography (CT) scan is an effective approach for reliable and early detection of the disease. However, it could be difficult to rapidly identify by...

Descripción completa

Detalles Bibliográficos
Autores principales: Scarpiniti, Michele, Sarv Ahrabi, Sima, Baccarelli, Enzo, Piazzo, Lorenzo, Momenzadeh, Alireza
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8675154/
https://www.ncbi.nlm.nih.gov/pubmed/34937995
http://dx.doi.org/10.1016/j.eswa.2021.116366
_version_ 1784615822203813888
author Scarpiniti, Michele
Sarv Ahrabi, Sima
Baccarelli, Enzo
Piazzo, Lorenzo
Momenzadeh, Alireza
author_facet Scarpiniti, Michele
Sarv Ahrabi, Sima
Baccarelli, Enzo
Piazzo, Lorenzo
Momenzadeh, Alireza
author_sort Scarpiniti, Michele
collection PubMed
description Chest imaging can represent a powerful tool for detecting the Coronavirus disease 2019 (COVID-19). Among the available technologies, the chest Computed Tomography (CT) scan is an effective approach for reliable and early detection of the disease. However, it could be difficult to rapidly identify by human inspection anomalous area in CT images belonging to the COVID-19 disease. Hence, it becomes necessary the exploitation of suitable automatic algorithms able to quick and precisely identify the disease, possibly by using few labeled input data, because large amounts of CT scans are not usually available for the COVID-19 disease. The method proposed in this paper is based on the exploitation of the compact and meaningful hidden representation provided by a Deep Denoising Convolutional Autoencoder (DDCAE). Specifically, the proposed DDCAE, trained on some target CT scans in an unsupervised way, is used to build up a robust statistical representation generating a target histogram. A suitable statistical distance measures how this target histogram is far from a companion histogram evaluated on an unknown test scan: if this distance is greater of a threshold, the test image is labeled as anomaly, i.e. the scan belongs to a patient affected by COVID-19 disease. Some experimental results and comparisons with other state-of-the-art methods show the effectiveness of the proposed approach reaching a top accuracy of 100% and similar high values for other metrics. In conclusion, by using a statistical representation of the hidden features provided by DDCAEs, the developed architecture is able to differentiate COVID-19 from normal and pneumonia scans with high reliability and at low computational cost.
format Online
Article
Text
id pubmed-8675154
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Elsevier Ltd.
record_format MEDLINE/PubMed
spelling pubmed-86751542021-12-17 A novel unsupervised approach based on the hidden features of Deep Denoising Autoencoders for COVID-19 disease detection Scarpiniti, Michele Sarv Ahrabi, Sima Baccarelli, Enzo Piazzo, Lorenzo Momenzadeh, Alireza Expert Syst Appl Article Chest imaging can represent a powerful tool for detecting the Coronavirus disease 2019 (COVID-19). Among the available technologies, the chest Computed Tomography (CT) scan is an effective approach for reliable and early detection of the disease. However, it could be difficult to rapidly identify by human inspection anomalous area in CT images belonging to the COVID-19 disease. Hence, it becomes necessary the exploitation of suitable automatic algorithms able to quick and precisely identify the disease, possibly by using few labeled input data, because large amounts of CT scans are not usually available for the COVID-19 disease. The method proposed in this paper is based on the exploitation of the compact and meaningful hidden representation provided by a Deep Denoising Convolutional Autoencoder (DDCAE). Specifically, the proposed DDCAE, trained on some target CT scans in an unsupervised way, is used to build up a robust statistical representation generating a target histogram. A suitable statistical distance measures how this target histogram is far from a companion histogram evaluated on an unknown test scan: if this distance is greater of a threshold, the test image is labeled as anomaly, i.e. the scan belongs to a patient affected by COVID-19 disease. Some experimental results and comparisons with other state-of-the-art methods show the effectiveness of the proposed approach reaching a top accuracy of 100% and similar high values for other metrics. In conclusion, by using a statistical representation of the hidden features provided by DDCAEs, the developed architecture is able to differentiate COVID-19 from normal and pneumonia scans with high reliability and at low computational cost. Elsevier Ltd. 2022-04-15 2021-12-16 /pmc/articles/PMC8675154/ /pubmed/34937995 http://dx.doi.org/10.1016/j.eswa.2021.116366 Text en © 2021 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Scarpiniti, Michele
Sarv Ahrabi, Sima
Baccarelli, Enzo
Piazzo, Lorenzo
Momenzadeh, Alireza
A novel unsupervised approach based on the hidden features of Deep Denoising Autoencoders for COVID-19 disease detection
title A novel unsupervised approach based on the hidden features of Deep Denoising Autoencoders for COVID-19 disease detection
title_full A novel unsupervised approach based on the hidden features of Deep Denoising Autoencoders for COVID-19 disease detection
title_fullStr A novel unsupervised approach based on the hidden features of Deep Denoising Autoencoders for COVID-19 disease detection
title_full_unstemmed A novel unsupervised approach based on the hidden features of Deep Denoising Autoencoders for COVID-19 disease detection
title_short A novel unsupervised approach based on the hidden features of Deep Denoising Autoencoders for COVID-19 disease detection
title_sort novel unsupervised approach based on the hidden features of deep denoising autoencoders for covid-19 disease detection
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8675154/
https://www.ncbi.nlm.nih.gov/pubmed/34937995
http://dx.doi.org/10.1016/j.eswa.2021.116366
work_keys_str_mv AT scarpinitimichele anovelunsupervisedapproachbasedonthehiddenfeaturesofdeepdenoisingautoencodersforcovid19diseasedetection
AT sarvahrabisima anovelunsupervisedapproachbasedonthehiddenfeaturesofdeepdenoisingautoencodersforcovid19diseasedetection
AT baccarellienzo anovelunsupervisedapproachbasedonthehiddenfeaturesofdeepdenoisingautoencodersforcovid19diseasedetection
AT piazzolorenzo anovelunsupervisedapproachbasedonthehiddenfeaturesofdeepdenoisingautoencodersforcovid19diseasedetection
AT momenzadehalireza anovelunsupervisedapproachbasedonthehiddenfeaturesofdeepdenoisingautoencodersforcovid19diseasedetection
AT scarpinitimichele novelunsupervisedapproachbasedonthehiddenfeaturesofdeepdenoisingautoencodersforcovid19diseasedetection
AT sarvahrabisima novelunsupervisedapproachbasedonthehiddenfeaturesofdeepdenoisingautoencodersforcovid19diseasedetection
AT baccarellienzo novelunsupervisedapproachbasedonthehiddenfeaturesofdeepdenoisingautoencodersforcovid19diseasedetection
AT piazzolorenzo novelunsupervisedapproachbasedonthehiddenfeaturesofdeepdenoisingautoencodersforcovid19diseasedetection
AT momenzadehalireza novelunsupervisedapproachbasedonthehiddenfeaturesofdeepdenoisingautoencodersforcovid19diseasedetection