Cargando…

Crop loss identification at field parcel scale using satellite remote sensing and machine learning

Identifying crop loss at field parcel scale using satellite images is challenging: first, crop loss is caused by many factors during the growing season; second, reliable reference data about crop loss are lacking; third, there are many ways to define crop loss. This study investigates the feasibilit...

Descripción completa

Detalles Bibliográficos
Autores principales: Hiremath, Santosh, Wittke, Samantha, Palosuo, Taru, Kaivosoja, Jere, Tao, Fulu, Proll, Maximilian, Puttonen, Eetu, Peltonen-Sainio, Pirjo, Marttinen, Pekka, Mamitsuka, Hiroshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8675751/
https://www.ncbi.nlm.nih.gov/pubmed/34914721
http://dx.doi.org/10.1371/journal.pone.0251952
_version_ 1784615937498939392
author Hiremath, Santosh
Wittke, Samantha
Palosuo, Taru
Kaivosoja, Jere
Tao, Fulu
Proll, Maximilian
Puttonen, Eetu
Peltonen-Sainio, Pirjo
Marttinen, Pekka
Mamitsuka, Hiroshi
author_facet Hiremath, Santosh
Wittke, Samantha
Palosuo, Taru
Kaivosoja, Jere
Tao, Fulu
Proll, Maximilian
Puttonen, Eetu
Peltonen-Sainio, Pirjo
Marttinen, Pekka
Mamitsuka, Hiroshi
author_sort Hiremath, Santosh
collection PubMed
description Identifying crop loss at field parcel scale using satellite images is challenging: first, crop loss is caused by many factors during the growing season; second, reliable reference data about crop loss are lacking; third, there are many ways to define crop loss. This study investigates the feasibility of using satellite images to train machine learning (ML) models to classify agricultural field parcels into those with and without crop loss. The reference data for this study was provided by Finnish Food Authority (FFA) containing crop loss information of approximately 1.4 million field parcels in Finland covering about 3.5 million ha from 2000 to 2015. This reference data was combined with Normalised Difference Vegetation Index (NDVI) derived from Landsat 7 images, in which more than 80% of the possible data are missing. Despite the hard problem with extremely noisy data, among the four ML models we tested, random forest (with mean imputation and missing value indicators) achieved the average AUC (area under the ROC curve) of 0.688±0.059 over all 16 years with the range [0.602, 0.795] in identifying new crop-loss fields based on reference fields of the same year. To our knowledge, this is one of the first large scale benchmark study of using machine learning for crop loss classification at field parcel scale. The classification setting and trained models have numerous potential applications, for example, allowing government agencies or insurance companies to verify crop-loss claims by farmers and realise efficient agricultural monitoring.
format Online
Article
Text
id pubmed-8675751
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-86757512021-12-17 Crop loss identification at field parcel scale using satellite remote sensing and machine learning Hiremath, Santosh Wittke, Samantha Palosuo, Taru Kaivosoja, Jere Tao, Fulu Proll, Maximilian Puttonen, Eetu Peltonen-Sainio, Pirjo Marttinen, Pekka Mamitsuka, Hiroshi PLoS One Research Article Identifying crop loss at field parcel scale using satellite images is challenging: first, crop loss is caused by many factors during the growing season; second, reliable reference data about crop loss are lacking; third, there are many ways to define crop loss. This study investigates the feasibility of using satellite images to train machine learning (ML) models to classify agricultural field parcels into those with and without crop loss. The reference data for this study was provided by Finnish Food Authority (FFA) containing crop loss information of approximately 1.4 million field parcels in Finland covering about 3.5 million ha from 2000 to 2015. This reference data was combined with Normalised Difference Vegetation Index (NDVI) derived from Landsat 7 images, in which more than 80% of the possible data are missing. Despite the hard problem with extremely noisy data, among the four ML models we tested, random forest (with mean imputation and missing value indicators) achieved the average AUC (area under the ROC curve) of 0.688±0.059 over all 16 years with the range [0.602, 0.795] in identifying new crop-loss fields based on reference fields of the same year. To our knowledge, this is one of the first large scale benchmark study of using machine learning for crop loss classification at field parcel scale. The classification setting and trained models have numerous potential applications, for example, allowing government agencies or insurance companies to verify crop-loss claims by farmers and realise efficient agricultural monitoring. Public Library of Science 2021-12-16 /pmc/articles/PMC8675751/ /pubmed/34914721 http://dx.doi.org/10.1371/journal.pone.0251952 Text en © 2021 Hiremath et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Hiremath, Santosh
Wittke, Samantha
Palosuo, Taru
Kaivosoja, Jere
Tao, Fulu
Proll, Maximilian
Puttonen, Eetu
Peltonen-Sainio, Pirjo
Marttinen, Pekka
Mamitsuka, Hiroshi
Crop loss identification at field parcel scale using satellite remote sensing and machine learning
title Crop loss identification at field parcel scale using satellite remote sensing and machine learning
title_full Crop loss identification at field parcel scale using satellite remote sensing and machine learning
title_fullStr Crop loss identification at field parcel scale using satellite remote sensing and machine learning
title_full_unstemmed Crop loss identification at field parcel scale using satellite remote sensing and machine learning
title_short Crop loss identification at field parcel scale using satellite remote sensing and machine learning
title_sort crop loss identification at field parcel scale using satellite remote sensing and machine learning
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8675751/
https://www.ncbi.nlm.nih.gov/pubmed/34914721
http://dx.doi.org/10.1371/journal.pone.0251952
work_keys_str_mv AT hiremathsantosh croplossidentificationatfieldparcelscaleusingsatelliteremotesensingandmachinelearning
AT wittkesamantha croplossidentificationatfieldparcelscaleusingsatelliteremotesensingandmachinelearning
AT palosuotaru croplossidentificationatfieldparcelscaleusingsatelliteremotesensingandmachinelearning
AT kaivosojajere croplossidentificationatfieldparcelscaleusingsatelliteremotesensingandmachinelearning
AT taofulu croplossidentificationatfieldparcelscaleusingsatelliteremotesensingandmachinelearning
AT prollmaximilian croplossidentificationatfieldparcelscaleusingsatelliteremotesensingandmachinelearning
AT puttoneneetu croplossidentificationatfieldparcelscaleusingsatelliteremotesensingandmachinelearning
AT peltonensainiopirjo croplossidentificationatfieldparcelscaleusingsatelliteremotesensingandmachinelearning
AT marttinenpekka croplossidentificationatfieldparcelscaleusingsatelliteremotesensingandmachinelearning
AT mamitsukahiroshi croplossidentificationatfieldparcelscaleusingsatelliteremotesensingandmachinelearning