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A two‐stage neural network prediction of chronic kidney disease

Accurate detection of chronic kidney disease (CKD) plays a pivotal role in early diagnosis and treatment. Measured glomerular filtration rate (mGFR) is considered the benchmark indicator in measuring the kidney function. However, due to the high resource cost of measuring mGFR, it is usually approxi...

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Autores principales: Peng, Hongquan, Zhu, Haibin, Ieong, Chi Wa Ao, Tao, Tao, Tsai, Tsung Yang, Liu, Zhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8675857/
https://www.ncbi.nlm.nih.gov/pubmed/34185395
http://dx.doi.org/10.1049/syb2.12031
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author Peng, Hongquan
Zhu, Haibin
Ieong, Chi Wa Ao
Tao, Tao
Tsai, Tsung Yang
Liu, Zhi
author_facet Peng, Hongquan
Zhu, Haibin
Ieong, Chi Wa Ao
Tao, Tao
Tsai, Tsung Yang
Liu, Zhi
author_sort Peng, Hongquan
collection PubMed
description Accurate detection of chronic kidney disease (CKD) plays a pivotal role in early diagnosis and treatment. Measured glomerular filtration rate (mGFR) is considered the benchmark indicator in measuring the kidney function. However, due to the high resource cost of measuring mGFR, it is usually approximated by the estimated glomerular filtration rate, underscoring an urgent need for more precise and stable approaches. With the introduction of novel machine learning methodologies, prediction performance is shown to be significantly improved across all available data, but the performance is still limited because of the lack of models in dealing with ultra‐high dimensional datasets. This study aims to provide a two‐stage neural network approach for prediction of GFR and to suggest some other useful biomarkers obtained from the blood metabolites in measuring GFR. It is a composite of feature shrinkage and neural network when the number of features is much larger than the number of training samples. The results show that the proposed method outperforms the existing ones, such as convolutionneural network and direct deep neural network.
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spelling pubmed-86758572022-02-16 A two‐stage neural network prediction of chronic kidney disease Peng, Hongquan Zhu, Haibin Ieong, Chi Wa Ao Tao, Tao Tsai, Tsung Yang Liu, Zhi IET Syst Biol Original Research Papers Accurate detection of chronic kidney disease (CKD) plays a pivotal role in early diagnosis and treatment. Measured glomerular filtration rate (mGFR) is considered the benchmark indicator in measuring the kidney function. However, due to the high resource cost of measuring mGFR, it is usually approximated by the estimated glomerular filtration rate, underscoring an urgent need for more precise and stable approaches. With the introduction of novel machine learning methodologies, prediction performance is shown to be significantly improved across all available data, but the performance is still limited because of the lack of models in dealing with ultra‐high dimensional datasets. This study aims to provide a two‐stage neural network approach for prediction of GFR and to suggest some other useful biomarkers obtained from the blood metabolites in measuring GFR. It is a composite of feature shrinkage and neural network when the number of features is much larger than the number of training samples. The results show that the proposed method outperforms the existing ones, such as convolutionneural network and direct deep neural network. John Wiley and Sons Inc. 2021-06-29 /pmc/articles/PMC8675857/ /pubmed/34185395 http://dx.doi.org/10.1049/syb2.12031 Text en © 2021 The Authors. IET Systems Biology published by John Wiley & Sons Ltd on behalf of The Institution of Engineering and Technology. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Original Research Papers
Peng, Hongquan
Zhu, Haibin
Ieong, Chi Wa Ao
Tao, Tao
Tsai, Tsung Yang
Liu, Zhi
A two‐stage neural network prediction of chronic kidney disease
title A two‐stage neural network prediction of chronic kidney disease
title_full A two‐stage neural network prediction of chronic kidney disease
title_fullStr A two‐stage neural network prediction of chronic kidney disease
title_full_unstemmed A two‐stage neural network prediction of chronic kidney disease
title_short A two‐stage neural network prediction of chronic kidney disease
title_sort two‐stage neural network prediction of chronic kidney disease
topic Original Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8675857/
https://www.ncbi.nlm.nih.gov/pubmed/34185395
http://dx.doi.org/10.1049/syb2.12031
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