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A promising prognostic signature for lung adenocarcinoma (LUAD) patients basing on 6 hypoxia-related genes
BACKGROUND: Hypoxia signaling plays a critical role in the development of lung adenocarcinoma (LUAD). We herein aimed to explore the prognostic value of hypoxia-related genes and construct the hypoxia-related prognostic signature for LUAD patients. METHODS: A total of 26 hypoxia-related genes were c...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Lippincott Williams & Wilkins
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8677978/ https://www.ncbi.nlm.nih.gov/pubmed/34918689 http://dx.doi.org/10.1097/MD.0000000000028237 |
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author | Luo, Jie Du, Xiaotian |
author_facet | Luo, Jie Du, Xiaotian |
author_sort | Luo, Jie |
collection | PubMed |
description | BACKGROUND: Hypoxia signaling plays a critical role in the development of lung adenocarcinoma (LUAD). We herein aimed to explore the prognostic value of hypoxia-related genes and construct the hypoxia-related prognostic signature for LUAD patients. METHODS: A total of 26 hypoxia-related genes were collected. Five hundred thirteen and 246 LUAD samples were obtained from the Cancer Genome Atlas and Gene Expression Omnibus databases, respectively. Univariate Cox regression and LASSO Cox regression analyses were conducted to screen the hypoxia-related genes associated with the prognosis of LUAD patients, which would be used for constructing prognosis predictive model for LUAD patients. Multivariate Cox regression analysis was done to determine the independent prognostic factors. The Nomogram model was constructed to predict the prognosis of LUAD patients. RESULTS: Based on 26 hypoxia-related genes, LUAD samples could be divided into 4 clusters with different prognoses. Among which, 6 genes were included to construct the Risk Score and the LUAD patients with higher Risk Score had worse prognosis. Besides, the Nomogram based on all the independent risk factors could relatively reliably predict the survival probability. And 9 types of immune cells’ infiltration was significantly differential between high and low risk LUAD patients. CONCLUSION: The Risk Score model based on the 6 crucial hypoxia-related genes could relatively reliably predict the prognosis of LUAD patients. |
format | Online Article Text |
id | pubmed-8677978 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Lippincott Williams & Wilkins |
record_format | MEDLINE/PubMed |
spelling | pubmed-86779782021-12-20 A promising prognostic signature for lung adenocarcinoma (LUAD) patients basing on 6 hypoxia-related genes Luo, Jie Du, Xiaotian Medicine (Baltimore) 5700 BACKGROUND: Hypoxia signaling plays a critical role in the development of lung adenocarcinoma (LUAD). We herein aimed to explore the prognostic value of hypoxia-related genes and construct the hypoxia-related prognostic signature for LUAD patients. METHODS: A total of 26 hypoxia-related genes were collected. Five hundred thirteen and 246 LUAD samples were obtained from the Cancer Genome Atlas and Gene Expression Omnibus databases, respectively. Univariate Cox regression and LASSO Cox regression analyses were conducted to screen the hypoxia-related genes associated with the prognosis of LUAD patients, which would be used for constructing prognosis predictive model for LUAD patients. Multivariate Cox regression analysis was done to determine the independent prognostic factors. The Nomogram model was constructed to predict the prognosis of LUAD patients. RESULTS: Based on 26 hypoxia-related genes, LUAD samples could be divided into 4 clusters with different prognoses. Among which, 6 genes were included to construct the Risk Score and the LUAD patients with higher Risk Score had worse prognosis. Besides, the Nomogram based on all the independent risk factors could relatively reliably predict the survival probability. And 9 types of immune cells’ infiltration was significantly differential between high and low risk LUAD patients. CONCLUSION: The Risk Score model based on the 6 crucial hypoxia-related genes could relatively reliably predict the prognosis of LUAD patients. Lippincott Williams & Wilkins 2021-12-17 /pmc/articles/PMC8677978/ /pubmed/34918689 http://dx.doi.org/10.1097/MD.0000000000028237 Text en Copyright © 2021 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/) |
spellingShingle | 5700 Luo, Jie Du, Xiaotian A promising prognostic signature for lung adenocarcinoma (LUAD) patients basing on 6 hypoxia-related genes |
title | A promising prognostic signature for lung adenocarcinoma (LUAD) patients basing on 6 hypoxia-related genes |
title_full | A promising prognostic signature for lung adenocarcinoma (LUAD) patients basing on 6 hypoxia-related genes |
title_fullStr | A promising prognostic signature for lung adenocarcinoma (LUAD) patients basing on 6 hypoxia-related genes |
title_full_unstemmed | A promising prognostic signature for lung adenocarcinoma (LUAD) patients basing on 6 hypoxia-related genes |
title_short | A promising prognostic signature for lung adenocarcinoma (LUAD) patients basing on 6 hypoxia-related genes |
title_sort | promising prognostic signature for lung adenocarcinoma (luad) patients basing on 6 hypoxia-related genes |
topic | 5700 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8677978/ https://www.ncbi.nlm.nih.gov/pubmed/34918689 http://dx.doi.org/10.1097/MD.0000000000028237 |
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