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Detecting early signs of Alzheimer’s disease and related dementia onset from the EHR

As dementia is widely under-detected, a predictive model using electronic health records (EHR) could provide a method for early screening to implement preventive strategies. There is limited research on using EHR to identify persons with Alzheimer’s disease (AD) and related dementias (RD). In a data...

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Autores principales: Schliep, Karen, Shepelak, Zachary, Bitter, Nicolas, Gouripeddi, Ramkiran, Ostbye, Truls, Smith, Ken, Abdelrahman, Samir, Tschanz, Joanne
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8680718/
http://dx.doi.org/10.1093/geroni/igab046.2435
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author Schliep, Karen
Shepelak, Zachary
Bitter, Nicolas
Gouripeddi, Ramkiran
Ostbye, Truls
Smith, Ken
Abdelrahman, Samir
Tschanz, Joanne
author_facet Schliep, Karen
Shepelak, Zachary
Bitter, Nicolas
Gouripeddi, Ramkiran
Ostbye, Truls
Smith, Ken
Abdelrahman, Samir
Tschanz, Joanne
author_sort Schliep, Karen
collection PubMed
description As dementia is widely under-detected, a predictive model using electronic health records (EHR) could provide a method for early screening to implement preventive strategies. There is limited research on using EHR to identify persons with Alzheimer’s disease (AD) and related dementias (RD). In a data-driven approach, we used all ICD-9 diagnosis and CPT procedure codes from statewide inpatient, ambulatory surgery, and Medicare records, in addition to age at baseline and gender, to detect AD/RD from the Cache County Study on Memory in Aging (1995–2009). After removing participants diagnosed with dementia at baseline (n=335), 3882 (82%) Cache County Study participants could be linked to inpatient, ambulatory surgery, and/or Medicare EHR records; 484 (12.5%) of these 3882 had incident all-cause dementia, with 308 (7.9%) having AD/AD comorbid with RD; and 176 (4.5%) having RD without AD. We removed participant’s ICD-9 codes occurring after first AD/RD diagnoses. EHR features (~2000) along with gold-standard diagnoses as class labels were then used to train and detect AD and/or RD using a Gradient Boosting Trees machine learning algorithm. Models evaluated with nested cross-validation yielded AUCs of 0.70 for all-cause dementia, 0.69 for AD/AD comorbid with RD, and 0.67 for RD without AD. Key factors detecting AD/RD included age at enrollment, cardiovascular, metabolic, and kidney disease, and sleep disturbances, with feature importance varying by record type and time frame prior to dementia onset. Our findings suggest that a patient’s health status up to 12 years prior may be useful in identifying individuals at-risk for dementia development.
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spelling pubmed-86807182021-12-17 Detecting early signs of Alzheimer’s disease and related dementia onset from the EHR Schliep, Karen Shepelak, Zachary Bitter, Nicolas Gouripeddi, Ramkiran Ostbye, Truls Smith, Ken Abdelrahman, Samir Tschanz, Joanne Innov Aging Abstracts As dementia is widely under-detected, a predictive model using electronic health records (EHR) could provide a method for early screening to implement preventive strategies. There is limited research on using EHR to identify persons with Alzheimer’s disease (AD) and related dementias (RD). In a data-driven approach, we used all ICD-9 diagnosis and CPT procedure codes from statewide inpatient, ambulatory surgery, and Medicare records, in addition to age at baseline and gender, to detect AD/RD from the Cache County Study on Memory in Aging (1995–2009). After removing participants diagnosed with dementia at baseline (n=335), 3882 (82%) Cache County Study participants could be linked to inpatient, ambulatory surgery, and/or Medicare EHR records; 484 (12.5%) of these 3882 had incident all-cause dementia, with 308 (7.9%) having AD/AD comorbid with RD; and 176 (4.5%) having RD without AD. We removed participant’s ICD-9 codes occurring after first AD/RD diagnoses. EHR features (~2000) along with gold-standard diagnoses as class labels were then used to train and detect AD and/or RD using a Gradient Boosting Trees machine learning algorithm. Models evaluated with nested cross-validation yielded AUCs of 0.70 for all-cause dementia, 0.69 for AD/AD comorbid with RD, and 0.67 for RD without AD. Key factors detecting AD/RD included age at enrollment, cardiovascular, metabolic, and kidney disease, and sleep disturbances, with feature importance varying by record type and time frame prior to dementia onset. Our findings suggest that a patient’s health status up to 12 years prior may be useful in identifying individuals at-risk for dementia development. Oxford University Press 2021-12-17 /pmc/articles/PMC8680718/ http://dx.doi.org/10.1093/geroni/igab046.2435 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of The Gerontological Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Abstracts
Schliep, Karen
Shepelak, Zachary
Bitter, Nicolas
Gouripeddi, Ramkiran
Ostbye, Truls
Smith, Ken
Abdelrahman, Samir
Tschanz, Joanne
Detecting early signs of Alzheimer’s disease and related dementia onset from the EHR
title Detecting early signs of Alzheimer’s disease and related dementia onset from the EHR
title_full Detecting early signs of Alzheimer’s disease and related dementia onset from the EHR
title_fullStr Detecting early signs of Alzheimer’s disease and related dementia onset from the EHR
title_full_unstemmed Detecting early signs of Alzheimer’s disease and related dementia onset from the EHR
title_short Detecting early signs of Alzheimer’s disease and related dementia onset from the EHR
title_sort detecting early signs of alzheimer’s disease and related dementia onset from the ehr
topic Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8680718/
http://dx.doi.org/10.1093/geroni/igab046.2435
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