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Rapid and concise quantification of mycelial growth by microscopic image intensity model and application to mass cultivation of fungi
The microbial food fermentation industry requires real-time monitoring and accurate quantification of cells. However, filamentous fungi are difficult to quantify as they have complex cell types such as pellet, spores, and dispersed hyphae. In this study, numerous data of microscopic image intensity...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8683468/ https://www.ncbi.nlm.nih.gov/pubmed/34921189 http://dx.doi.org/10.1038/s41598-021-03512-4 |
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author | Lee, Soo Kweon Lee, Ju Hun Kim, Hyeong Ryeol Chun, Youngsang Lee, Ja Hyun Park, Chulhwan Yoo, Hah Young Kim, Seung Wook |
author_facet | Lee, Soo Kweon Lee, Ju Hun Kim, Hyeong Ryeol Chun, Youngsang Lee, Ja Hyun Park, Chulhwan Yoo, Hah Young Kim, Seung Wook |
author_sort | Lee, Soo Kweon |
collection | PubMed |
description | The microbial food fermentation industry requires real-time monitoring and accurate quantification of cells. However, filamentous fungi are difficult to quantify as they have complex cell types such as pellet, spores, and dispersed hyphae. In this study, numerous data of microscopic image intensity (MII) were used to develop a simple and accurate quantification method of Cordyceps mycelium. The dry cell weight (DCW) of the sample collected during the fermentation was measured. In addition, the intensity values were obtained through the ImageJ program after converting the microscopic images. The prediction model obtained by analyzing the correlation between MII and DCW was evaluated through a simple linear regression method and found to be statistically significant (R(2) = 0.941, p < 0.001). In addition, validation with randomly selected samples showed significant accuracy, thus, this model is expected to be used as a valuable tool for predicting and quantifying fungal growth in various industries. |
format | Online Article Text |
id | pubmed-8683468 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-86834682021-12-20 Rapid and concise quantification of mycelial growth by microscopic image intensity model and application to mass cultivation of fungi Lee, Soo Kweon Lee, Ju Hun Kim, Hyeong Ryeol Chun, Youngsang Lee, Ja Hyun Park, Chulhwan Yoo, Hah Young Kim, Seung Wook Sci Rep Article The microbial food fermentation industry requires real-time monitoring and accurate quantification of cells. However, filamentous fungi are difficult to quantify as they have complex cell types such as pellet, spores, and dispersed hyphae. In this study, numerous data of microscopic image intensity (MII) were used to develop a simple and accurate quantification method of Cordyceps mycelium. The dry cell weight (DCW) of the sample collected during the fermentation was measured. In addition, the intensity values were obtained through the ImageJ program after converting the microscopic images. The prediction model obtained by analyzing the correlation between MII and DCW was evaluated through a simple linear regression method and found to be statistically significant (R(2) = 0.941, p < 0.001). In addition, validation with randomly selected samples showed significant accuracy, thus, this model is expected to be used as a valuable tool for predicting and quantifying fungal growth in various industries. Nature Publishing Group UK 2021-12-17 /pmc/articles/PMC8683468/ /pubmed/34921189 http://dx.doi.org/10.1038/s41598-021-03512-4 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Lee, Soo Kweon Lee, Ju Hun Kim, Hyeong Ryeol Chun, Youngsang Lee, Ja Hyun Park, Chulhwan Yoo, Hah Young Kim, Seung Wook Rapid and concise quantification of mycelial growth by microscopic image intensity model and application to mass cultivation of fungi |
title | Rapid and concise quantification of mycelial growth by microscopic image intensity model and application to mass cultivation of fungi |
title_full | Rapid and concise quantification of mycelial growth by microscopic image intensity model and application to mass cultivation of fungi |
title_fullStr | Rapid and concise quantification of mycelial growth by microscopic image intensity model and application to mass cultivation of fungi |
title_full_unstemmed | Rapid and concise quantification of mycelial growth by microscopic image intensity model and application to mass cultivation of fungi |
title_short | Rapid and concise quantification of mycelial growth by microscopic image intensity model and application to mass cultivation of fungi |
title_sort | rapid and concise quantification of mycelial growth by microscopic image intensity model and application to mass cultivation of fungi |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8683468/ https://www.ncbi.nlm.nih.gov/pubmed/34921189 http://dx.doi.org/10.1038/s41598-021-03512-4 |
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