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Mutations in artificial self-replicating tiles: A step toward Darwinian evolution

Artificial self-replication and exponential growth holds the promise of gaining a better understanding of fundamental processes in nature but also of evolving new materials and devices with useful properties. A system of DNA origami dimers has been shown to exhibit exponential growth and selection....

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Detalles Bibliográficos
Autores principales: Zhou, Feng, Sha, Ruojie, Ni, Heng, Seeman, Nadrian, Chaikin, Paul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8685680/
https://www.ncbi.nlm.nih.gov/pubmed/34873040
http://dx.doi.org/10.1073/pnas.2111193118
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author Zhou, Feng
Sha, Ruojie
Ni, Heng
Seeman, Nadrian
Chaikin, Paul
author_facet Zhou, Feng
Sha, Ruojie
Ni, Heng
Seeman, Nadrian
Chaikin, Paul
author_sort Zhou, Feng
collection PubMed
description Artificial self-replication and exponential growth holds the promise of gaining a better understanding of fundamental processes in nature but also of evolving new materials and devices with useful properties. A system of DNA origami dimers has been shown to exhibit exponential growth and selection. Here we introduce mutation and growth advantages to study the possibility of Darwinian-like evolution. We seed and grow one dimer species, AB, from A and B monomers that doubles in each cycle. A similar species from C and D monomers can replicate at a controlled growth rate of two or four per cycle but is unseeded. Introducing a small mutation rate so that AB parents infrequently template CD offspring we show experimentally that the CD species can take over the system in approximately six generations in an advantageous environment. This demonstration opens the door to the use of evolution in materials design.
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spelling pubmed-86856802022-01-06 Mutations in artificial self-replicating tiles: A step toward Darwinian evolution Zhou, Feng Sha, Ruojie Ni, Heng Seeman, Nadrian Chaikin, Paul Proc Natl Acad Sci U S A Physical Sciences Artificial self-replication and exponential growth holds the promise of gaining a better understanding of fundamental processes in nature but also of evolving new materials and devices with useful properties. A system of DNA origami dimers has been shown to exhibit exponential growth and selection. Here we introduce mutation and growth advantages to study the possibility of Darwinian-like evolution. We seed and grow one dimer species, AB, from A and B monomers that doubles in each cycle. A similar species from C and D monomers can replicate at a controlled growth rate of two or four per cycle but is unseeded. Introducing a small mutation rate so that AB parents infrequently template CD offspring we show experimentally that the CD species can take over the system in approximately six generations in an advantageous environment. This demonstration opens the door to the use of evolution in materials design. National Academy of Sciences 2021-12-06 2021-12-14 /pmc/articles/PMC8685680/ /pubmed/34873040 http://dx.doi.org/10.1073/pnas.2111193118 Text en Copyright © 2021 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Physical Sciences
Zhou, Feng
Sha, Ruojie
Ni, Heng
Seeman, Nadrian
Chaikin, Paul
Mutations in artificial self-replicating tiles: A step toward Darwinian evolution
title Mutations in artificial self-replicating tiles: A step toward Darwinian evolution
title_full Mutations in artificial self-replicating tiles: A step toward Darwinian evolution
title_fullStr Mutations in artificial self-replicating tiles: A step toward Darwinian evolution
title_full_unstemmed Mutations in artificial self-replicating tiles: A step toward Darwinian evolution
title_short Mutations in artificial self-replicating tiles: A step toward Darwinian evolution
title_sort mutations in artificial self-replicating tiles: a step toward darwinian evolution
topic Physical Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8685680/
https://www.ncbi.nlm.nih.gov/pubmed/34873040
http://dx.doi.org/10.1073/pnas.2111193118
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