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Maplaria: a user friendly web-application for spatio-temporal malaria prevalence mapping

BACKGROUND: Model-based geostatistical (MBG) methods have been extensively used to map malaria risk using community survey data in low-resource settings where disease registries are incomplete or non-existent. However, the wider adoption of MBG methods by national control programmes to inform health...

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Autores principales: Giorgi, Emanuele, Macharia, Peter M., Woodmansey, Jack, Snow, Robert W., Rowlingson, Barry
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8686323/
https://www.ncbi.nlm.nih.gov/pubmed/34930265
http://dx.doi.org/10.1186/s12936-021-04011-7
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author Giorgi, Emanuele
Macharia, Peter M.
Woodmansey, Jack
Snow, Robert W.
Rowlingson, Barry
author_facet Giorgi, Emanuele
Macharia, Peter M.
Woodmansey, Jack
Snow, Robert W.
Rowlingson, Barry
author_sort Giorgi, Emanuele
collection PubMed
description BACKGROUND: Model-based geostatistical (MBG) methods have been extensively used to map malaria risk using community survey data in low-resource settings where disease registries are incomplete or non-existent. However, the wider adoption of MBG methods by national control programmes to inform health policy decisions is hindered by the lack of advanced statistical expertise and suitable computational equipment. Here, Maplaria, an interactive, user-friendly web-application that allows users to upload their own malaria prevalence data and carry out geostatistical prediction of annual malaria prevalence at any desired spatial scale, is introduced. METHODS: In the design of the Maplaria web application, two main criteria were considered: the application should be able to classify subnational divisions into the most likely endemicity levels; the web application should allow only minimal input from the user in the set-up of the geostatistical inference process. To achieve this, the process of fitting and validating the geostatistical models is carried out by statistical experts using publicly available malaria survey data from the Harvard database. The stage of geostatistical prediction is entirely user-driven and allows the user to upload malaria data, as well as vector data that define the administrative boundaries for the generation of spatially aggregated inferences. RESULTS: The process of data uploading and processing is split into a series of steps spread across screens through the progressive disclosure technique that prevents the user being immediately overwhelmed by the length of the form. Each of these is illustrated using a data set from the Malaria Indicator carried out in Tanzania in 2017 as an example. CONCLUSIONS: Maplaria application provides a user-friendly solution to the problem making geostatistical methods more accessible to users that have not undertaken formal training in statistics. The application is a useful tool that can be used to foster ownership, among policy makers, of disease risk maps and promote better use of data for decision-making in low resource settings. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12936-021-04011-7.
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spelling pubmed-86863232021-12-20 Maplaria: a user friendly web-application for spatio-temporal malaria prevalence mapping Giorgi, Emanuele Macharia, Peter M. Woodmansey, Jack Snow, Robert W. Rowlingson, Barry Malar J Research BACKGROUND: Model-based geostatistical (MBG) methods have been extensively used to map malaria risk using community survey data in low-resource settings where disease registries are incomplete or non-existent. However, the wider adoption of MBG methods by national control programmes to inform health policy decisions is hindered by the lack of advanced statistical expertise and suitable computational equipment. Here, Maplaria, an interactive, user-friendly web-application that allows users to upload their own malaria prevalence data and carry out geostatistical prediction of annual malaria prevalence at any desired spatial scale, is introduced. METHODS: In the design of the Maplaria web application, two main criteria were considered: the application should be able to classify subnational divisions into the most likely endemicity levels; the web application should allow only minimal input from the user in the set-up of the geostatistical inference process. To achieve this, the process of fitting and validating the geostatistical models is carried out by statistical experts using publicly available malaria survey data from the Harvard database. The stage of geostatistical prediction is entirely user-driven and allows the user to upload malaria data, as well as vector data that define the administrative boundaries for the generation of spatially aggregated inferences. RESULTS: The process of data uploading and processing is split into a series of steps spread across screens through the progressive disclosure technique that prevents the user being immediately overwhelmed by the length of the form. Each of these is illustrated using a data set from the Malaria Indicator carried out in Tanzania in 2017 as an example. CONCLUSIONS: Maplaria application provides a user-friendly solution to the problem making geostatistical methods more accessible to users that have not undertaken formal training in statistics. The application is a useful tool that can be used to foster ownership, among policy makers, of disease risk maps and promote better use of data for decision-making in low resource settings. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12936-021-04011-7. BioMed Central 2021-12-20 /pmc/articles/PMC8686323/ /pubmed/34930265 http://dx.doi.org/10.1186/s12936-021-04011-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Giorgi, Emanuele
Macharia, Peter M.
Woodmansey, Jack
Snow, Robert W.
Rowlingson, Barry
Maplaria: a user friendly web-application for spatio-temporal malaria prevalence mapping
title Maplaria: a user friendly web-application for spatio-temporal malaria prevalence mapping
title_full Maplaria: a user friendly web-application for spatio-temporal malaria prevalence mapping
title_fullStr Maplaria: a user friendly web-application for spatio-temporal malaria prevalence mapping
title_full_unstemmed Maplaria: a user friendly web-application for spatio-temporal malaria prevalence mapping
title_short Maplaria: a user friendly web-application for spatio-temporal malaria prevalence mapping
title_sort maplaria: a user friendly web-application for spatio-temporal malaria prevalence mapping
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8686323/
https://www.ncbi.nlm.nih.gov/pubmed/34930265
http://dx.doi.org/10.1186/s12936-021-04011-7
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