Cargando…
Deep Learning–Assisted Burn Wound Diagnosis: Diagnostic Model Development Study
BACKGROUND: Accurate assessment of the percentage total body surface area (%TBSA) of burn wounds is crucial in the management of burn patients. The resuscitation fluid and nutritional needs of burn patients, their need for intensive unit care, and probability of mortality are all directly related to...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
JMIR Publications
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8686480/ https://www.ncbi.nlm.nih.gov/pubmed/34860674 http://dx.doi.org/10.2196/22798 |
_version_ | 1784618023619919872 |
---|---|
author | Chang, Che Wei Lai, Feipei Christian, Mesakh Chen, Yu Chun Hsu, Ching Chen, Yo Shen Chang, Dun Hao Roan, Tyng Luen Yu, Yen Che |
author_facet | Chang, Che Wei Lai, Feipei Christian, Mesakh Chen, Yu Chun Hsu, Ching Chen, Yo Shen Chang, Dun Hao Roan, Tyng Luen Yu, Yen Che |
author_sort | Chang, Che Wei |
collection | PubMed |
description | BACKGROUND: Accurate assessment of the percentage total body surface area (%TBSA) of burn wounds is crucial in the management of burn patients. The resuscitation fluid and nutritional needs of burn patients, their need for intensive unit care, and probability of mortality are all directly related to %TBSA. It is difficult to estimate a burn area of irregular shape by inspection. Many articles have reported discrepancies in estimating %TBSA by different doctors. OBJECTIVE: We propose a method, based on deep learning, for burn wound detection, segmentation, and calculation of %TBSA on a pixel-to-pixel basis. METHODS: A 2-step procedure was used to convert burn wound diagnosis into %TBSA. In the first step, images of burn wounds were collected from medical records and labeled by burn surgeons, and the data set was then input into 2 deep learning architectures, U-Net and Mask R-CNN, each configured with 2 different backbones, to segment the burn wounds. In the second step, we collected and labeled images of hands to create another data set, which was also input into U-Net and Mask R-CNN to segment the hands. The %TBSA of burn wounds was then calculated by comparing the pixels of mask areas on images of the burn wound and hand of the same patient according to the rule of hand, which states that one’s hand accounts for 0.8% of TBSA. RESULTS: A total of 2591 images of burn wounds were collected and labeled to form the burn wound data set. The data set was randomly split into training, validation, and testing sets in a ratio of 8:1:1. Four hundred images of volar hands were collected and labeled to form the hand data set, which was also split into 3 sets using the same method. For the images of burn wounds, Mask R-CNN with ResNet101 had the best segmentation result with a Dice coefficient (DC) of 0.9496, while U-Net with ResNet101 had a DC of 0.8545. For the hand images, U-Net and Mask R-CNN had similar performance with DC values of 0.9920 and 0.9910, respectively. Lastly, we conducted a test diagnosis in a burn patient. Mask R-CNN with ResNet101 had on average less deviation (0.115% TBSA) from the ground truth than burn surgeons. CONCLUSIONS: This is one of the first studies to diagnose all depths of burn wounds and convert the segmentation results into %TBSA using different deep learning models. We aimed to assist medical staff in estimating burn size more accurately, thereby helping to provide precise care to burn victims. |
format | Online Article Text |
id | pubmed-8686480 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | JMIR Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-86864802022-01-10 Deep Learning–Assisted Burn Wound Diagnosis: Diagnostic Model Development Study Chang, Che Wei Lai, Feipei Christian, Mesakh Chen, Yu Chun Hsu, Ching Chen, Yo Shen Chang, Dun Hao Roan, Tyng Luen Yu, Yen Che JMIR Med Inform Original Paper BACKGROUND: Accurate assessment of the percentage total body surface area (%TBSA) of burn wounds is crucial in the management of burn patients. The resuscitation fluid and nutritional needs of burn patients, their need for intensive unit care, and probability of mortality are all directly related to %TBSA. It is difficult to estimate a burn area of irregular shape by inspection. Many articles have reported discrepancies in estimating %TBSA by different doctors. OBJECTIVE: We propose a method, based on deep learning, for burn wound detection, segmentation, and calculation of %TBSA on a pixel-to-pixel basis. METHODS: A 2-step procedure was used to convert burn wound diagnosis into %TBSA. In the first step, images of burn wounds were collected from medical records and labeled by burn surgeons, and the data set was then input into 2 deep learning architectures, U-Net and Mask R-CNN, each configured with 2 different backbones, to segment the burn wounds. In the second step, we collected and labeled images of hands to create another data set, which was also input into U-Net and Mask R-CNN to segment the hands. The %TBSA of burn wounds was then calculated by comparing the pixels of mask areas on images of the burn wound and hand of the same patient according to the rule of hand, which states that one’s hand accounts for 0.8% of TBSA. RESULTS: A total of 2591 images of burn wounds were collected and labeled to form the burn wound data set. The data set was randomly split into training, validation, and testing sets in a ratio of 8:1:1. Four hundred images of volar hands were collected and labeled to form the hand data set, which was also split into 3 sets using the same method. For the images of burn wounds, Mask R-CNN with ResNet101 had the best segmentation result with a Dice coefficient (DC) of 0.9496, while U-Net with ResNet101 had a DC of 0.8545. For the hand images, U-Net and Mask R-CNN had similar performance with DC values of 0.9920 and 0.9910, respectively. Lastly, we conducted a test diagnosis in a burn patient. Mask R-CNN with ResNet101 had on average less deviation (0.115% TBSA) from the ground truth than burn surgeons. CONCLUSIONS: This is one of the first studies to diagnose all depths of burn wounds and convert the segmentation results into %TBSA using different deep learning models. We aimed to assist medical staff in estimating burn size more accurately, thereby helping to provide precise care to burn victims. JMIR Publications 2021-12-02 /pmc/articles/PMC8686480/ /pubmed/34860674 http://dx.doi.org/10.2196/22798 Text en ©Che Wei Chang, Feipei Lai, Mesakh Christian, Yu Chun Chen, Ching Hsu, Yo Shen Chen, Dun Hao Chang, Tyng Luen Roan, Yen Che Yu. Originally published in JMIR Medical Informatics (https://medinform.jmir.org), 02.12.2021. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on https://medinform.jmir.org/, as well as this copyright and license information must be included. |
spellingShingle | Original Paper Chang, Che Wei Lai, Feipei Christian, Mesakh Chen, Yu Chun Hsu, Ching Chen, Yo Shen Chang, Dun Hao Roan, Tyng Luen Yu, Yen Che Deep Learning–Assisted Burn Wound Diagnosis: Diagnostic Model Development Study |
title | Deep Learning–Assisted Burn Wound Diagnosis: Diagnostic Model Development Study |
title_full | Deep Learning–Assisted Burn Wound Diagnosis: Diagnostic Model Development Study |
title_fullStr | Deep Learning–Assisted Burn Wound Diagnosis: Diagnostic Model Development Study |
title_full_unstemmed | Deep Learning–Assisted Burn Wound Diagnosis: Diagnostic Model Development Study |
title_short | Deep Learning–Assisted Burn Wound Diagnosis: Diagnostic Model Development Study |
title_sort | deep learning–assisted burn wound diagnosis: diagnostic model development study |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8686480/ https://www.ncbi.nlm.nih.gov/pubmed/34860674 http://dx.doi.org/10.2196/22798 |
work_keys_str_mv | AT changchewei deeplearningassistedburnwounddiagnosisdiagnosticmodeldevelopmentstudy AT laifeipei deeplearningassistedburnwounddiagnosisdiagnosticmodeldevelopmentstudy AT christianmesakh deeplearningassistedburnwounddiagnosisdiagnosticmodeldevelopmentstudy AT chenyuchun deeplearningassistedburnwounddiagnosisdiagnosticmodeldevelopmentstudy AT hsuching deeplearningassistedburnwounddiagnosisdiagnosticmodeldevelopmentstudy AT chenyoshen deeplearningassistedburnwounddiagnosisdiagnosticmodeldevelopmentstudy AT changdunhao deeplearningassistedburnwounddiagnosisdiagnosticmodeldevelopmentstudy AT roantyngluen deeplearningassistedburnwounddiagnosisdiagnosticmodeldevelopmentstudy AT yuyenche deeplearningassistedburnwounddiagnosisdiagnosticmodeldevelopmentstudy |