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Classification of drug molecules for oxidative stress signalling pathway
In humans, oxidative stress is involved in the development of diabetes, cancer, hypertension, Alzheimers’ disease, and heart failure. One of the mechanisms in the cellular defence against oxidative stress is the activation of the Nrf2‐antioxidant response element (ARE) signalling pathway. Computatio...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Institution of Engineering and Technology
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8687196/ https://www.ncbi.nlm.nih.gov/pubmed/31538958 http://dx.doi.org/10.1049/iet-syb.2018.5078 |
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author | Verma, Nikhil Singh, Harpreet Khanna, Divya Rana, Prashant Singh Bhadada, Sanjay Kumar |
author_facet | Verma, Nikhil Singh, Harpreet Khanna, Divya Rana, Prashant Singh Bhadada, Sanjay Kumar |
author_sort | Verma, Nikhil |
collection | PubMed |
description | In humans, oxidative stress is involved in the development of diabetes, cancer, hypertension, Alzheimers’ disease, and heart failure. One of the mechanisms in the cellular defence against oxidative stress is the activation of the Nrf2‐antioxidant response element (ARE) signalling pathway. Computation of activity, efficacy, and potency score of ARE signalling pathway and to propose a multi‐level prediction scheme for the same is the main aim of the study as it contributes in a big amount to the improvement of oxidative stress in humans. Applying the process of knowledge discovery from data, required knowledge is gathered and then machine learning techniques are applied to propose a multi‐level scheme. The validation of the proposed scheme is done using the K‐fold cross‐validation method and an accuracy of 90% is achieved for prediction of activity score for ARE molecules which determine their power to refine oxidative stress. |
format | Online Article Text |
id | pubmed-8687196 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | The Institution of Engineering and Technology |
record_format | MEDLINE/PubMed |
spelling | pubmed-86871962022-02-16 Classification of drug molecules for oxidative stress signalling pathway Verma, Nikhil Singh, Harpreet Khanna, Divya Rana, Prashant Singh Bhadada, Sanjay Kumar IET Syst Biol Research Articles In humans, oxidative stress is involved in the development of diabetes, cancer, hypertension, Alzheimers’ disease, and heart failure. One of the mechanisms in the cellular defence against oxidative stress is the activation of the Nrf2‐antioxidant response element (ARE) signalling pathway. Computation of activity, efficacy, and potency score of ARE signalling pathway and to propose a multi‐level prediction scheme for the same is the main aim of the study as it contributes in a big amount to the improvement of oxidative stress in humans. Applying the process of knowledge discovery from data, required knowledge is gathered and then machine learning techniques are applied to propose a multi‐level scheme. The validation of the proposed scheme is done using the K‐fold cross‐validation method and an accuracy of 90% is achieved for prediction of activity score for ARE molecules which determine their power to refine oxidative stress. The Institution of Engineering and Technology 2019-08-02 /pmc/articles/PMC8687196/ /pubmed/31538958 http://dx.doi.org/10.1049/iet-syb.2018.5078 Text en © 2019 The Institution of Engineering and Technology https://creativecommons.org/licenses/by/3.0/This is an open access article published by the IET under the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/ (https://creativecommons.org/licenses/by/3.0/) ) |
spellingShingle | Research Articles Verma, Nikhil Singh, Harpreet Khanna, Divya Rana, Prashant Singh Bhadada, Sanjay Kumar Classification of drug molecules for oxidative stress signalling pathway |
title | Classification of drug molecules for oxidative stress signalling pathway |
title_full | Classification of drug molecules for oxidative stress signalling pathway |
title_fullStr | Classification of drug molecules for oxidative stress signalling pathway |
title_full_unstemmed | Classification of drug molecules for oxidative stress signalling pathway |
title_short | Classification of drug molecules for oxidative stress signalling pathway |
title_sort | classification of drug molecules for oxidative stress signalling pathway |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8687196/ https://www.ncbi.nlm.nih.gov/pubmed/31538958 http://dx.doi.org/10.1049/iet-syb.2018.5078 |
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