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Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation
Xiamenmycins, a series of prenylated benzopyran compounds with anti‐fibrotic bioactivities, were isolated from a mangrove‐derived Streptomyces xiamenensis. To fulfil the requirements of pharmaceutical investigations, a high production of xiamenmycin is needed. In this study,, the authors present a k...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Institution of Engineering and Technology
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8687290/ https://www.ncbi.nlm.nih.gov/pubmed/26816395 http://dx.doi.org/10.1049/iet-syb.2014.0054 |
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author | Xu, Min‐juan Chen, Yong‐cong Xu, Jun Ao, Ping Zhu, Xiao‐mei |
author_facet | Xu, Min‐juan Chen, Yong‐cong Xu, Jun Ao, Ping Zhu, Xiao‐mei |
author_sort | Xu, Min‐juan |
collection | PubMed |
description | Xiamenmycins, a series of prenylated benzopyran compounds with anti‐fibrotic bioactivities, were isolated from a mangrove‐derived Streptomyces xiamenensis. To fulfil the requirements of pharmaceutical investigations, a high production of xiamenmycin is needed. In this study,, the authors present a kinetic metabolic model to evaluate fluxes in an engineered Streptomyces lividans with xiamenmycin‐oriented genetic modification based on generic enzymatic rate equations and stability constraints. Lyapunov function was used for a viability optimisation. From their kinetic model, the flux distributions for the engineered S. lividans fed on glucose and glycerol as carbon sources were calculated. They found that if the bacterium can utilise glucose simultaneously with glycerol, xiamenmycin production can be enhanced by 40% theoretically, while maintaining the same growth rate. Glycerol may increase the flux for phosphoenolpyruvate synthesis without interfering citric acid cycle. They therefore believe this study demonstrates a possible new direction for bioengineering of S. lividans. |
format | Online Article Text |
id | pubmed-8687290 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | The Institution of Engineering and Technology |
record_format | MEDLINE/PubMed |
spelling | pubmed-86872902022-02-16 Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation Xu, Min‐juan Chen, Yong‐cong Xu, Jun Ao, Ping Zhu, Xiao‐mei IET Syst Biol Article Xiamenmycins, a series of prenylated benzopyran compounds with anti‐fibrotic bioactivities, were isolated from a mangrove‐derived Streptomyces xiamenensis. To fulfil the requirements of pharmaceutical investigations, a high production of xiamenmycin is needed. In this study,, the authors present a kinetic metabolic model to evaluate fluxes in an engineered Streptomyces lividans with xiamenmycin‐oriented genetic modification based on generic enzymatic rate equations and stability constraints. Lyapunov function was used for a viability optimisation. From their kinetic model, the flux distributions for the engineered S. lividans fed on glucose and glycerol as carbon sources were calculated. They found that if the bacterium can utilise glucose simultaneously with glycerol, xiamenmycin production can be enhanced by 40% theoretically, while maintaining the same growth rate. Glycerol may increase the flux for phosphoenolpyruvate synthesis without interfering citric acid cycle. They therefore believe this study demonstrates a possible new direction for bioengineering of S. lividans. The Institution of Engineering and Technology 2016-02-01 /pmc/articles/PMC8687290/ /pubmed/26816395 http://dx.doi.org/10.1049/iet-syb.2014.0054 Text en © 2020 The Institution of Engineering and Technology https://creativecommons.org/licenses/by/3.0/This is an open access article published by the IET under the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/ (https://creativecommons.org/licenses/by/3.0/) ) |
spellingShingle | Article Xu, Min‐juan Chen, Yong‐cong Xu, Jun Ao, Ping Zhu, Xiao‐mei Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation |
title | Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation |
title_full | Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation |
title_fullStr | Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation |
title_full_unstemmed | Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation |
title_short | Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation |
title_sort | kinetic model of metabolic network for xiamenmycin biosynthetic optimisation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8687290/ https://www.ncbi.nlm.nih.gov/pubmed/26816395 http://dx.doi.org/10.1049/iet-syb.2014.0054 |
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