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Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation

Xiamenmycins, a series of prenylated benzopyran compounds with anti‐fibrotic bioactivities, were isolated from a mangrove‐derived Streptomyces xiamenensis. To fulfil the requirements of pharmaceutical investigations, a high production of xiamenmycin is needed. In this study,, the authors present a k...

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Autores principales: Xu, Min‐juan, Chen, Yong‐cong, Xu, Jun, Ao, Ping, Zhu, Xiao‐mei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Institution of Engineering and Technology 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8687290/
https://www.ncbi.nlm.nih.gov/pubmed/26816395
http://dx.doi.org/10.1049/iet-syb.2014.0054
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author Xu, Min‐juan
Chen, Yong‐cong
Xu, Jun
Ao, Ping
Zhu, Xiao‐mei
author_facet Xu, Min‐juan
Chen, Yong‐cong
Xu, Jun
Ao, Ping
Zhu, Xiao‐mei
author_sort Xu, Min‐juan
collection PubMed
description Xiamenmycins, a series of prenylated benzopyran compounds with anti‐fibrotic bioactivities, were isolated from a mangrove‐derived Streptomyces xiamenensis. To fulfil the requirements of pharmaceutical investigations, a high production of xiamenmycin is needed. In this study,, the authors present a kinetic metabolic model to evaluate fluxes in an engineered Streptomyces lividans with xiamenmycin‐oriented genetic modification based on generic enzymatic rate equations and stability constraints. Lyapunov function was used for a viability optimisation. From their kinetic model, the flux distributions for the engineered S. lividans fed on glucose and glycerol as carbon sources were calculated. They found that if the bacterium can utilise glucose simultaneously with glycerol, xiamenmycin production can be enhanced by 40% theoretically, while maintaining the same growth rate. Glycerol may increase the flux for phosphoenolpyruvate synthesis without interfering citric acid cycle. They therefore believe this study demonstrates a possible new direction for bioengineering of S. lividans.
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spelling pubmed-86872902022-02-16 Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation Xu, Min‐juan Chen, Yong‐cong Xu, Jun Ao, Ping Zhu, Xiao‐mei IET Syst Biol Article Xiamenmycins, a series of prenylated benzopyran compounds with anti‐fibrotic bioactivities, were isolated from a mangrove‐derived Streptomyces xiamenensis. To fulfil the requirements of pharmaceutical investigations, a high production of xiamenmycin is needed. In this study,, the authors present a kinetic metabolic model to evaluate fluxes in an engineered Streptomyces lividans with xiamenmycin‐oriented genetic modification based on generic enzymatic rate equations and stability constraints. Lyapunov function was used for a viability optimisation. From their kinetic model, the flux distributions for the engineered S. lividans fed on glucose and glycerol as carbon sources were calculated. They found that if the bacterium can utilise glucose simultaneously with glycerol, xiamenmycin production can be enhanced by 40% theoretically, while maintaining the same growth rate. Glycerol may increase the flux for phosphoenolpyruvate synthesis without interfering citric acid cycle. They therefore believe this study demonstrates a possible new direction for bioengineering of S. lividans. The Institution of Engineering and Technology 2016-02-01 /pmc/articles/PMC8687290/ /pubmed/26816395 http://dx.doi.org/10.1049/iet-syb.2014.0054 Text en © 2020 The Institution of Engineering and Technology https://creativecommons.org/licenses/by/3.0/This is an open access article published by the IET under the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/ (https://creativecommons.org/licenses/by/3.0/) )
spellingShingle Article
Xu, Min‐juan
Chen, Yong‐cong
Xu, Jun
Ao, Ping
Zhu, Xiao‐mei
Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation
title Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation
title_full Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation
title_fullStr Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation
title_full_unstemmed Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation
title_short Kinetic model of metabolic network for xiamenmycin biosynthetic optimisation
title_sort kinetic model of metabolic network for xiamenmycin biosynthetic optimisation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8687290/
https://www.ncbi.nlm.nih.gov/pubmed/26816395
http://dx.doi.org/10.1049/iet-syb.2014.0054
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