Cargando…

Predictive Biomarkers for Postmyocardial Infarction Heart Failure Using Machine Learning: A Secondary Analysis of a Cohort Study

BACKGROUND: There are few biomarkers with an excellent predictive value for postacute myocardial infarction (MI) patients who developed heart failure (HF). This study aimed to screen candidate biomarkers to predict post-MI HF. METHODS: This is a secondary analysis of a single-center cohort study inc...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Feng, Sun, Jin-Yu, Wu, Li-Da, Qu, Qiang, Zhang, Zhen-Ye, Chen, Xu-Fei, Kan, Jun-Yan, Wang, Chao, Wang, Ru-Xing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8687817/
https://www.ncbi.nlm.nih.gov/pubmed/34938340
http://dx.doi.org/10.1155/2021/2903543
_version_ 1784618253106020352
author Li, Feng
Sun, Jin-Yu
Wu, Li-Da
Qu, Qiang
Zhang, Zhen-Ye
Chen, Xu-Fei
Kan, Jun-Yan
Wang, Chao
Wang, Ru-Xing
author_facet Li, Feng
Sun, Jin-Yu
Wu, Li-Da
Qu, Qiang
Zhang, Zhen-Ye
Chen, Xu-Fei
Kan, Jun-Yan
Wang, Chao
Wang, Ru-Xing
author_sort Li, Feng
collection PubMed
description BACKGROUND: There are few biomarkers with an excellent predictive value for postacute myocardial infarction (MI) patients who developed heart failure (HF). This study aimed to screen candidate biomarkers to predict post-MI HF. METHODS: This is a secondary analysis of a single-center cohort study including nine post-MI HF patients and eight post-MI patients who remained HF-free over a 6-month follow-up. Transcriptional profiling was analyzed using the whole blood samples collected at admission, discharge, and 1-month follow-up. We screened differentially expressed genes and identified key modules using weighted gene coexpression network analysis. We confirmed the candidate biomarkers using the developed external datasets on post-MI HF. The receiver operating characteristic curves were created to evaluate the predictive value of these candidate biomarkers. RESULTS: A total of 6,778, 1,136, and 1,974 genes (dataset 1) were differently expressed at admission, discharge, and 1-month follow-up, respectively. The white and royal blue modules were most significantly correlated with post-MI HF (dataset 2). After overlapping dataset 1, dataset 2, and external datasets (dataset 3), we identified five candidate biomarkers, including FCGR2A, GSDMB, MIR330, MED1, and SQSTM1. When GSDMB and SQSTM1 were combined, the area under the curve achieved 1.00, 0.85, and 0.89 in admission, discharge, and 1-month follow-up, respectively. CONCLUSIONS: This study demonstrates that FCGR2A, GSDMB, MIR330, MED1, and SQSTM1 are the candidate predictive biomarker genes for post-MI HF, and the combination of GSDMB and SQSTM1 has a high predictive value.
format Online
Article
Text
id pubmed-8687817
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-86878172021-12-21 Predictive Biomarkers for Postmyocardial Infarction Heart Failure Using Machine Learning: A Secondary Analysis of a Cohort Study Li, Feng Sun, Jin-Yu Wu, Li-Da Qu, Qiang Zhang, Zhen-Ye Chen, Xu-Fei Kan, Jun-Yan Wang, Chao Wang, Ru-Xing Evid Based Complement Alternat Med Research Article BACKGROUND: There are few biomarkers with an excellent predictive value for postacute myocardial infarction (MI) patients who developed heart failure (HF). This study aimed to screen candidate biomarkers to predict post-MI HF. METHODS: This is a secondary analysis of a single-center cohort study including nine post-MI HF patients and eight post-MI patients who remained HF-free over a 6-month follow-up. Transcriptional profiling was analyzed using the whole blood samples collected at admission, discharge, and 1-month follow-up. We screened differentially expressed genes and identified key modules using weighted gene coexpression network analysis. We confirmed the candidate biomarkers using the developed external datasets on post-MI HF. The receiver operating characteristic curves were created to evaluate the predictive value of these candidate biomarkers. RESULTS: A total of 6,778, 1,136, and 1,974 genes (dataset 1) were differently expressed at admission, discharge, and 1-month follow-up, respectively. The white and royal blue modules were most significantly correlated with post-MI HF (dataset 2). After overlapping dataset 1, dataset 2, and external datasets (dataset 3), we identified five candidate biomarkers, including FCGR2A, GSDMB, MIR330, MED1, and SQSTM1. When GSDMB and SQSTM1 were combined, the area under the curve achieved 1.00, 0.85, and 0.89 in admission, discharge, and 1-month follow-up, respectively. CONCLUSIONS: This study demonstrates that FCGR2A, GSDMB, MIR330, MED1, and SQSTM1 are the candidate predictive biomarker genes for post-MI HF, and the combination of GSDMB and SQSTM1 has a high predictive value. Hindawi 2021-12-13 /pmc/articles/PMC8687817/ /pubmed/34938340 http://dx.doi.org/10.1155/2021/2903543 Text en Copyright © 2021 Feng Li et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Li, Feng
Sun, Jin-Yu
Wu, Li-Da
Qu, Qiang
Zhang, Zhen-Ye
Chen, Xu-Fei
Kan, Jun-Yan
Wang, Chao
Wang, Ru-Xing
Predictive Biomarkers for Postmyocardial Infarction Heart Failure Using Machine Learning: A Secondary Analysis of a Cohort Study
title Predictive Biomarkers for Postmyocardial Infarction Heart Failure Using Machine Learning: A Secondary Analysis of a Cohort Study
title_full Predictive Biomarkers for Postmyocardial Infarction Heart Failure Using Machine Learning: A Secondary Analysis of a Cohort Study
title_fullStr Predictive Biomarkers for Postmyocardial Infarction Heart Failure Using Machine Learning: A Secondary Analysis of a Cohort Study
title_full_unstemmed Predictive Biomarkers for Postmyocardial Infarction Heart Failure Using Machine Learning: A Secondary Analysis of a Cohort Study
title_short Predictive Biomarkers for Postmyocardial Infarction Heart Failure Using Machine Learning: A Secondary Analysis of a Cohort Study
title_sort predictive biomarkers for postmyocardial infarction heart failure using machine learning: a secondary analysis of a cohort study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8687817/
https://www.ncbi.nlm.nih.gov/pubmed/34938340
http://dx.doi.org/10.1155/2021/2903543
work_keys_str_mv AT lifeng predictivebiomarkersforpostmyocardialinfarctionheartfailureusingmachinelearningasecondaryanalysisofacohortstudy
AT sunjinyu predictivebiomarkersforpostmyocardialinfarctionheartfailureusingmachinelearningasecondaryanalysisofacohortstudy
AT wulida predictivebiomarkersforpostmyocardialinfarctionheartfailureusingmachinelearningasecondaryanalysisofacohortstudy
AT quqiang predictivebiomarkersforpostmyocardialinfarctionheartfailureusingmachinelearningasecondaryanalysisofacohortstudy
AT zhangzhenye predictivebiomarkersforpostmyocardialinfarctionheartfailureusingmachinelearningasecondaryanalysisofacohortstudy
AT chenxufei predictivebiomarkersforpostmyocardialinfarctionheartfailureusingmachinelearningasecondaryanalysisofacohortstudy
AT kanjunyan predictivebiomarkersforpostmyocardialinfarctionheartfailureusingmachinelearningasecondaryanalysisofacohortstudy
AT wangchao predictivebiomarkersforpostmyocardialinfarctionheartfailureusingmachinelearningasecondaryanalysisofacohortstudy
AT wangruxing predictivebiomarkersforpostmyocardialinfarctionheartfailureusingmachinelearningasecondaryanalysisofacohortstudy