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Latent Class Analysis-Derived Subphenotypes are Generalizable to Observational Cohorts of Acute Respiratory Distress Syndrome: A Prospective Study
RATIONALE: Using latent class analysis (LCA), two subphenotypes of acute respiratory distress syndrome (ARDS) have consistently been identified in five randomized controlled trials (RCTs), with distinct biological characteristics, divergent outcomes and differential treatment responses to randomized...
Autores principales: | , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8688287/ https://www.ncbi.nlm.nih.gov/pubmed/34253679 http://dx.doi.org/10.1136/thoraxjnl-2021-217158 |
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author | Sinha, Pratik Delucchi, Kevin L Chen, Yue Zhuo, Hanjing Abbott, Jason Wang, Chunxue Wickersham, Nancy McNeil, J. Brennan Jauregui, Alejandra Ke, Serena Vessel, Kathryn Gomez, Antonio Hendrickson, Carolyn M Kangelaris, Kirsten N Sarma, Aartik Leligdowicz, Aleksandra Liu, Kathleen Matthay, Michael A Ware, Lorraine B Calfee, Carolyn S |
author_facet | Sinha, Pratik Delucchi, Kevin L Chen, Yue Zhuo, Hanjing Abbott, Jason Wang, Chunxue Wickersham, Nancy McNeil, J. Brennan Jauregui, Alejandra Ke, Serena Vessel, Kathryn Gomez, Antonio Hendrickson, Carolyn M Kangelaris, Kirsten N Sarma, Aartik Leligdowicz, Aleksandra Liu, Kathleen Matthay, Michael A Ware, Lorraine B Calfee, Carolyn S |
author_sort | Sinha, Pratik |
collection | PubMed |
description | RATIONALE: Using latent class analysis (LCA), two subphenotypes of acute respiratory distress syndrome (ARDS) have consistently been identified in five randomized controlled trials (RCTs), with distinct biological characteristics, divergent outcomes and differential treatment responses to randomized interventions. Their existence in unselected populations of ARDS remains unknown. We sought to identify subphenotypes in observational cohorts of ARDS using LCA. METHODS: LCA was independently applied to ARDS patients from two prospective observational cohorts of patients admitted to the ICU, derived from the VALID (n=624), and EARLI (n=335) studies. Clinical and biological data were used as class-defining variables. To test for concordance with prior ARDS subphenotypes, the performance metrics of parsimonious classifier models (Interleukin-8, bicarbonate, Protein C and vasopressor-use), previously-developed in RCTs, were evaluated in EARLI and VALID with LCA-derived subphenotypes as the gold-standard. RESULTS: A two-class model best fit the population in VALID (p=0.0010) and in EARLI (p<0.0001). Class 2 comprised 26% and 37% of the populations in VALID and EARLI respectively. Consistent with the previously described “Hyperinflammatory” subphenotype, Class 2 was characterized by higher pro-inflammatory biomarkers, acidosis and increased shock and worse clinical outcomes. The similarities between these and prior RCT-derived subphenotypes were further substantiated by the performance of the parsimonious classifier models in both cohorts (AUCs 0.92–0.94). The Hyperinflammatory subphenotype was associated with increased prevalence of chronic liver disease and neutropenia and reduced incidence of chronic obstructive pulmonary disease. Measurement of novel biomarkers showed significantly higher levels of matrix metalloproteinase-8 and markers of endothelial injury in the Hyperinflammatory subphenotype, whereas, matrix metalloproteinase-9 was significantly lower. CONCLUSION: Previously described subphenotypes are generalizable to unselected populations of non-trauma ARDS. |
format | Online Article Text |
id | pubmed-8688287 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
record_format | MEDLINE/PubMed |
spelling | pubmed-86882872023-01-01 Latent Class Analysis-Derived Subphenotypes are Generalizable to Observational Cohorts of Acute Respiratory Distress Syndrome: A Prospective Study Sinha, Pratik Delucchi, Kevin L Chen, Yue Zhuo, Hanjing Abbott, Jason Wang, Chunxue Wickersham, Nancy McNeil, J. Brennan Jauregui, Alejandra Ke, Serena Vessel, Kathryn Gomez, Antonio Hendrickson, Carolyn M Kangelaris, Kirsten N Sarma, Aartik Leligdowicz, Aleksandra Liu, Kathleen Matthay, Michael A Ware, Lorraine B Calfee, Carolyn S Thorax Article RATIONALE: Using latent class analysis (LCA), two subphenotypes of acute respiratory distress syndrome (ARDS) have consistently been identified in five randomized controlled trials (RCTs), with distinct biological characteristics, divergent outcomes and differential treatment responses to randomized interventions. Their existence in unselected populations of ARDS remains unknown. We sought to identify subphenotypes in observational cohorts of ARDS using LCA. METHODS: LCA was independently applied to ARDS patients from two prospective observational cohorts of patients admitted to the ICU, derived from the VALID (n=624), and EARLI (n=335) studies. Clinical and biological data were used as class-defining variables. To test for concordance with prior ARDS subphenotypes, the performance metrics of parsimonious classifier models (Interleukin-8, bicarbonate, Protein C and vasopressor-use), previously-developed in RCTs, were evaluated in EARLI and VALID with LCA-derived subphenotypes as the gold-standard. RESULTS: A two-class model best fit the population in VALID (p=0.0010) and in EARLI (p<0.0001). Class 2 comprised 26% and 37% of the populations in VALID and EARLI respectively. Consistent with the previously described “Hyperinflammatory” subphenotype, Class 2 was characterized by higher pro-inflammatory biomarkers, acidosis and increased shock and worse clinical outcomes. The similarities between these and prior RCT-derived subphenotypes were further substantiated by the performance of the parsimonious classifier models in both cohorts (AUCs 0.92–0.94). The Hyperinflammatory subphenotype was associated with increased prevalence of chronic liver disease and neutropenia and reduced incidence of chronic obstructive pulmonary disease. Measurement of novel biomarkers showed significantly higher levels of matrix metalloproteinase-8 and markers of endothelial injury in the Hyperinflammatory subphenotype, whereas, matrix metalloproteinase-9 was significantly lower. CONCLUSION: Previously described subphenotypes are generalizable to unselected populations of non-trauma ARDS. 2021-07-12 2022-01 /pmc/articles/PMC8688287/ /pubmed/34253679 http://dx.doi.org/10.1136/thoraxjnl-2021-217158 Text en https://creativecommons.org/licenses/by/4.0/The Submitting Author accepts and understands that any supply made under these terms is made by BMJ to the Submitting Author unless you are acting as an employee on behalf of your employer or a postgraduate student of an affiliated institution which is paying any applicable article publishing charge (“APC”) for Open Access articles. Where the Submitting Author wishes to make the Work available on an Open Access basis (and intends to pay the relevant APC), the terms of reuse of such Open Access shall be governed by a Creative Commons license – details of these licenses and which Creative Commons license will apply to this Work are set out in our license referred to above. |
spellingShingle | Article Sinha, Pratik Delucchi, Kevin L Chen, Yue Zhuo, Hanjing Abbott, Jason Wang, Chunxue Wickersham, Nancy McNeil, J. Brennan Jauregui, Alejandra Ke, Serena Vessel, Kathryn Gomez, Antonio Hendrickson, Carolyn M Kangelaris, Kirsten N Sarma, Aartik Leligdowicz, Aleksandra Liu, Kathleen Matthay, Michael A Ware, Lorraine B Calfee, Carolyn S Latent Class Analysis-Derived Subphenotypes are Generalizable to Observational Cohorts of Acute Respiratory Distress Syndrome: A Prospective Study |
title | Latent Class Analysis-Derived Subphenotypes are Generalizable to Observational Cohorts of Acute Respiratory Distress Syndrome: A Prospective Study |
title_full | Latent Class Analysis-Derived Subphenotypes are Generalizable to Observational Cohorts of Acute Respiratory Distress Syndrome: A Prospective Study |
title_fullStr | Latent Class Analysis-Derived Subphenotypes are Generalizable to Observational Cohorts of Acute Respiratory Distress Syndrome: A Prospective Study |
title_full_unstemmed | Latent Class Analysis-Derived Subphenotypes are Generalizable to Observational Cohorts of Acute Respiratory Distress Syndrome: A Prospective Study |
title_short | Latent Class Analysis-Derived Subphenotypes are Generalizable to Observational Cohorts of Acute Respiratory Distress Syndrome: A Prospective Study |
title_sort | latent class analysis-derived subphenotypes are generalizable to observational cohorts of acute respiratory distress syndrome: a prospective study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8688287/ https://www.ncbi.nlm.nih.gov/pubmed/34253679 http://dx.doi.org/10.1136/thoraxjnl-2021-217158 |
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