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Bioinformatics Analysis of Long Non-coding RNA and Related Diseases: An Overview

Long non-coding RNAs (lncRNAs) are usually located in the nucleus and cytoplasm of cells. The transcripts of lncRNAs are >200 nucleotides in length and do not encode proteins. Compared with small RNAs, lncRNAs have longer sequences, more complex spatial structures, and more diverse and complex me...

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Detalles Bibliográficos
Autores principales: Gong, Yuxin, Zhu, Wen, Sun, Meili, Shi, Lei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8692768/
https://www.ncbi.nlm.nih.gov/pubmed/34956340
http://dx.doi.org/10.3389/fgene.2021.813873
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author Gong, Yuxin
Zhu, Wen
Sun, Meili
Shi, Lei
author_facet Gong, Yuxin
Zhu, Wen
Sun, Meili
Shi, Lei
author_sort Gong, Yuxin
collection PubMed
description Long non-coding RNAs (lncRNAs) are usually located in the nucleus and cytoplasm of cells. The transcripts of lncRNAs are >200 nucleotides in length and do not encode proteins. Compared with small RNAs, lncRNAs have longer sequences, more complex spatial structures, and more diverse and complex mechanisms involved in the regulation of gene expression. LncRNAs are widely involved in the biological processes of cells, and in the occurrence and development of many human diseases. Many studies have shown that lncRNAs can induce the occurrence of diseases, and some lncRNAs undergo specific changes in tumor cells. Research into the roles of lncRNAs has covered the diagnosis of, for example, cardiovascular, cerebrovascular, and central nervous system diseases. The bioinformatics of lncRNAs has gradually become a research hotspot and has led to the discovery of a large number of lncRNAs and associated biological functions, and lncRNA databases and recognition models have been developed. In this review, the research progress of lncRNAs is discussed, and lncRNA-related databases and the mechanisms and modes of action of lncRNAs are described. In addition, disease-related lncRNA methods and the relationships between lncRNAs and human lung adenocarcinoma, rectal cancer, colon cancer, heart disease, and diabetes are discussed. Finally, the significance and existing problems of lncRNA research are considered.
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spelling pubmed-86927682021-12-23 Bioinformatics Analysis of Long Non-coding RNA and Related Diseases: An Overview Gong, Yuxin Zhu, Wen Sun, Meili Shi, Lei Front Genet Genetics Long non-coding RNAs (lncRNAs) are usually located in the nucleus and cytoplasm of cells. The transcripts of lncRNAs are >200 nucleotides in length and do not encode proteins. Compared with small RNAs, lncRNAs have longer sequences, more complex spatial structures, and more diverse and complex mechanisms involved in the regulation of gene expression. LncRNAs are widely involved in the biological processes of cells, and in the occurrence and development of many human diseases. Many studies have shown that lncRNAs can induce the occurrence of diseases, and some lncRNAs undergo specific changes in tumor cells. Research into the roles of lncRNAs has covered the diagnosis of, for example, cardiovascular, cerebrovascular, and central nervous system diseases. The bioinformatics of lncRNAs has gradually become a research hotspot and has led to the discovery of a large number of lncRNAs and associated biological functions, and lncRNA databases and recognition models have been developed. In this review, the research progress of lncRNAs is discussed, and lncRNA-related databases and the mechanisms and modes of action of lncRNAs are described. In addition, disease-related lncRNA methods and the relationships between lncRNAs and human lung adenocarcinoma, rectal cancer, colon cancer, heart disease, and diabetes are discussed. Finally, the significance and existing problems of lncRNA research are considered. Frontiers Media S.A. 2021-12-08 /pmc/articles/PMC8692768/ /pubmed/34956340 http://dx.doi.org/10.3389/fgene.2021.813873 Text en Copyright © 2021 Gong, Zhu, Sun and Shi. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Gong, Yuxin
Zhu, Wen
Sun, Meili
Shi, Lei
Bioinformatics Analysis of Long Non-coding RNA and Related Diseases: An Overview
title Bioinformatics Analysis of Long Non-coding RNA and Related Diseases: An Overview
title_full Bioinformatics Analysis of Long Non-coding RNA and Related Diseases: An Overview
title_fullStr Bioinformatics Analysis of Long Non-coding RNA and Related Diseases: An Overview
title_full_unstemmed Bioinformatics Analysis of Long Non-coding RNA and Related Diseases: An Overview
title_short Bioinformatics Analysis of Long Non-coding RNA and Related Diseases: An Overview
title_sort bioinformatics analysis of long non-coding rna and related diseases: an overview
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8692768/
https://www.ncbi.nlm.nih.gov/pubmed/34956340
http://dx.doi.org/10.3389/fgene.2021.813873
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