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CD146 as a Prognostic-Related Biomarker in ccRCC Correlating With Immune Infiltrates

BACKGROUNDS: CD146 is highly expressed in various malignant tumors and associated with the poor prognosis. However, the role of CD146 in clear cell renal cell carcinoma (ccRCC) is still unknown. This study aimed to identify the role of CD146 in ccRCC by integrated bioinformatics analysis. METHODS: C...

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Autores principales: Lv, Zheng, Feng, Hua-Yi, Tao, Wang, Li, Hong-Zhao, Zhang, Xu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8692769/
https://www.ncbi.nlm.nih.gov/pubmed/34956870
http://dx.doi.org/10.3389/fonc.2021.744107
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author Lv, Zheng
Feng, Hua-Yi
Tao, Wang
Li, Hong-Zhao
Zhang, Xu
author_facet Lv, Zheng
Feng, Hua-Yi
Tao, Wang
Li, Hong-Zhao
Zhang, Xu
author_sort Lv, Zheng
collection PubMed
description BACKGROUNDS: CD146 is highly expressed in various malignant tumors and associated with the poor prognosis. However, the role of CD146 in clear cell renal cell carcinoma (ccRCC) is still unknown. This study aimed to identify the role of CD146 in ccRCC by integrated bioinformatics analysis. METHODS: CD146 mRNA expression and methylation data in ccRCC was examined using the TIMER, UALCAN, and MethSurv databases. CD146 expression in paraffin-embedded tissues (140 cancer samples and 140 paracancer tissues) from our cohort were examined by immunohistochemistry assay. The LinkedOmics database was used to study the signaling pathways related to CD146 expression. TIMER and TISIDB were used to analyze the correlations among CD146, CD146-coexpressed genes, tumor-infiltrating immune cells, and immunomodulators. The relationship between CD146 and drug response in renal cancer cell lines was analyzed by the CTRP and CCLE databases. RESULTS: The mRNA and protein levels of CD146 were elevated in ccRCC tissues than that in paracancer tissues. The DNA methylation of CD146 in ccRCC tissues were lower than that in normal tissues. Importantly, high CD146 expression was associated with poor prognosis in patients with ccRCC. Furthermore, multivariate Cox regression analysis showed that CD146 was an independent prognostic factor in ccRCC. GO and KEGG pathway analyses indicated the co-expressed genes of CD146 were mainly related to a variety of immune-related pathways, including Th1 and Th2 cell differentiation, Th17 cell differentiation, and leukocyte transendothelial migration. Our data demonstrated that the expression and methylation status of CD146 were strongly correlated with immune infiltration levels, immunomodulators, and chemokines. Further, the sensitivity and resistance of renal cancer cell lines to some drugs were related to CD146 expression. CONCLUSIONS: Our study highlights the clinical significance of CD146 in ccRCC and provides novel insights into the immune function of CD146 in the tumor microenvironment.
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spelling pubmed-86927692021-12-23 CD146 as a Prognostic-Related Biomarker in ccRCC Correlating With Immune Infiltrates Lv, Zheng Feng, Hua-Yi Tao, Wang Li, Hong-Zhao Zhang, Xu Front Oncol Oncology BACKGROUNDS: CD146 is highly expressed in various malignant tumors and associated with the poor prognosis. However, the role of CD146 in clear cell renal cell carcinoma (ccRCC) is still unknown. This study aimed to identify the role of CD146 in ccRCC by integrated bioinformatics analysis. METHODS: CD146 mRNA expression and methylation data in ccRCC was examined using the TIMER, UALCAN, and MethSurv databases. CD146 expression in paraffin-embedded tissues (140 cancer samples and 140 paracancer tissues) from our cohort were examined by immunohistochemistry assay. The LinkedOmics database was used to study the signaling pathways related to CD146 expression. TIMER and TISIDB were used to analyze the correlations among CD146, CD146-coexpressed genes, tumor-infiltrating immune cells, and immunomodulators. The relationship between CD146 and drug response in renal cancer cell lines was analyzed by the CTRP and CCLE databases. RESULTS: The mRNA and protein levels of CD146 were elevated in ccRCC tissues than that in paracancer tissues. The DNA methylation of CD146 in ccRCC tissues were lower than that in normal tissues. Importantly, high CD146 expression was associated with poor prognosis in patients with ccRCC. Furthermore, multivariate Cox regression analysis showed that CD146 was an independent prognostic factor in ccRCC. GO and KEGG pathway analyses indicated the co-expressed genes of CD146 were mainly related to a variety of immune-related pathways, including Th1 and Th2 cell differentiation, Th17 cell differentiation, and leukocyte transendothelial migration. Our data demonstrated that the expression and methylation status of CD146 were strongly correlated with immune infiltration levels, immunomodulators, and chemokines. Further, the sensitivity and resistance of renal cancer cell lines to some drugs were related to CD146 expression. CONCLUSIONS: Our study highlights the clinical significance of CD146 in ccRCC and provides novel insights into the immune function of CD146 in the tumor microenvironment. Frontiers Media S.A. 2021-12-08 /pmc/articles/PMC8692769/ /pubmed/34956870 http://dx.doi.org/10.3389/fonc.2021.744107 Text en Copyright © 2021 Lv, Feng, Tao, Li and Zhang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Lv, Zheng
Feng, Hua-Yi
Tao, Wang
Li, Hong-Zhao
Zhang, Xu
CD146 as a Prognostic-Related Biomarker in ccRCC Correlating With Immune Infiltrates
title CD146 as a Prognostic-Related Biomarker in ccRCC Correlating With Immune Infiltrates
title_full CD146 as a Prognostic-Related Biomarker in ccRCC Correlating With Immune Infiltrates
title_fullStr CD146 as a Prognostic-Related Biomarker in ccRCC Correlating With Immune Infiltrates
title_full_unstemmed CD146 as a Prognostic-Related Biomarker in ccRCC Correlating With Immune Infiltrates
title_short CD146 as a Prognostic-Related Biomarker in ccRCC Correlating With Immune Infiltrates
title_sort cd146 as a prognostic-related biomarker in ccrcc correlating with immune infiltrates
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8692769/
https://www.ncbi.nlm.nih.gov/pubmed/34956870
http://dx.doi.org/10.3389/fonc.2021.744107
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