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Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader

The Tetraodontidae family encompasses several species which attract scientific interest in terms of their ecology and evolution. The silver-cheeked toadfish (Lagocephalus sceleratus) is a well-known “invasive sprinter” that has invaded and spread, in less than a decade, throughout the Eastern and pa...

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Autores principales: Danis, Theodoros, Papadogiannis, Vasileios, Tsakogiannis, Alexandros, Kristoffersen, Jon B., Golani, Daniel, Tsaparis, Dimitris, Sterioti, Aspasia, Kasapidis, Panagiotis, Kotoulas, Georgios, Magoulas, Antonios, Tsigenopoulos, Costas S., Manousaki, Tereza
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8692874/
https://www.ncbi.nlm.nih.gov/pubmed/34956332
http://dx.doi.org/10.3389/fgene.2021.790850
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author Danis, Theodoros
Papadogiannis, Vasileios
Tsakogiannis, Alexandros
Kristoffersen, Jon B.
Golani, Daniel
Tsaparis, Dimitris
Sterioti, Aspasia
Kasapidis, Panagiotis
Kotoulas, Georgios
Magoulas, Antonios
Tsigenopoulos, Costas S.
Manousaki, Tereza
author_facet Danis, Theodoros
Papadogiannis, Vasileios
Tsakogiannis, Alexandros
Kristoffersen, Jon B.
Golani, Daniel
Tsaparis, Dimitris
Sterioti, Aspasia
Kasapidis, Panagiotis
Kotoulas, Georgios
Magoulas, Antonios
Tsigenopoulos, Costas S.
Manousaki, Tereza
author_sort Danis, Theodoros
collection PubMed
description The Tetraodontidae family encompasses several species which attract scientific interest in terms of their ecology and evolution. The silver-cheeked toadfish (Lagocephalus sceleratus) is a well-known “invasive sprinter” that has invaded and spread, in less than a decade, throughout the Eastern and part of the Western Mediterranean Sea from the Red Sea through the Suez Canal. In this study, we built and analysed the first near-chromosome level genome assembly of L. sceleratus and explored its evolutionary landscape. Through a phylogenomic analysis, we positioned L. sceleratus closer to T. nigroviridis, compared to other members of the family, while gene family evolution analysis revealed that genes associated with the immune response have experienced rapid expansion, providing a genetic basis for studying how L. sceleratus is able to achieve highly successful colonisation. Moreover, we found that voltage-gated sodium channel (NaV 1.4) mutations previously connected to tetrodotoxin resistance in other pufferfishes are not found in L. sceleratus, highlighting the complex evolution of this trait. The high-quality genome assembly built here is expected to set the ground for future studies on the species biology.
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spelling pubmed-86928742021-12-23 Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader Danis, Theodoros Papadogiannis, Vasileios Tsakogiannis, Alexandros Kristoffersen, Jon B. Golani, Daniel Tsaparis, Dimitris Sterioti, Aspasia Kasapidis, Panagiotis Kotoulas, Georgios Magoulas, Antonios Tsigenopoulos, Costas S. Manousaki, Tereza Front Genet Genetics The Tetraodontidae family encompasses several species which attract scientific interest in terms of their ecology and evolution. The silver-cheeked toadfish (Lagocephalus sceleratus) is a well-known “invasive sprinter” that has invaded and spread, in less than a decade, throughout the Eastern and part of the Western Mediterranean Sea from the Red Sea through the Suez Canal. In this study, we built and analysed the first near-chromosome level genome assembly of L. sceleratus and explored its evolutionary landscape. Through a phylogenomic analysis, we positioned L. sceleratus closer to T. nigroviridis, compared to other members of the family, while gene family evolution analysis revealed that genes associated with the immune response have experienced rapid expansion, providing a genetic basis for studying how L. sceleratus is able to achieve highly successful colonisation. Moreover, we found that voltage-gated sodium channel (NaV 1.4) mutations previously connected to tetrodotoxin resistance in other pufferfishes are not found in L. sceleratus, highlighting the complex evolution of this trait. The high-quality genome assembly built here is expected to set the ground for future studies on the species biology. Frontiers Media S.A. 2021-12-08 /pmc/articles/PMC8692874/ /pubmed/34956332 http://dx.doi.org/10.3389/fgene.2021.790850 Text en Copyright © 2021 Danis, Papadogiannis, Tsakogiannis, Kristoffersen, Golani, Tsaparis, Sterioti, Kasapidis, Kotoulas, Magoulas, Tsigenopoulos and Manousaki. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Danis, Theodoros
Papadogiannis, Vasileios
Tsakogiannis, Alexandros
Kristoffersen, Jon B.
Golani, Daniel
Tsaparis, Dimitris
Sterioti, Aspasia
Kasapidis, Panagiotis
Kotoulas, Georgios
Magoulas, Antonios
Tsigenopoulos, Costas S.
Manousaki, Tereza
Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader
title Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader
title_full Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader
title_fullStr Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader
title_full_unstemmed Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader
title_short Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader
title_sort genome analysis of lagocephalus sceleratus: unraveling the genomic landscape of a successful invader
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8692874/
https://www.ncbi.nlm.nih.gov/pubmed/34956332
http://dx.doi.org/10.3389/fgene.2021.790850
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