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Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader
The Tetraodontidae family encompasses several species which attract scientific interest in terms of their ecology and evolution. The silver-cheeked toadfish (Lagocephalus sceleratus) is a well-known “invasive sprinter” that has invaded and spread, in less than a decade, throughout the Eastern and pa...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8692874/ https://www.ncbi.nlm.nih.gov/pubmed/34956332 http://dx.doi.org/10.3389/fgene.2021.790850 |
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author | Danis, Theodoros Papadogiannis, Vasileios Tsakogiannis, Alexandros Kristoffersen, Jon B. Golani, Daniel Tsaparis, Dimitris Sterioti, Aspasia Kasapidis, Panagiotis Kotoulas, Georgios Magoulas, Antonios Tsigenopoulos, Costas S. Manousaki, Tereza |
author_facet | Danis, Theodoros Papadogiannis, Vasileios Tsakogiannis, Alexandros Kristoffersen, Jon B. Golani, Daniel Tsaparis, Dimitris Sterioti, Aspasia Kasapidis, Panagiotis Kotoulas, Georgios Magoulas, Antonios Tsigenopoulos, Costas S. Manousaki, Tereza |
author_sort | Danis, Theodoros |
collection | PubMed |
description | The Tetraodontidae family encompasses several species which attract scientific interest in terms of their ecology and evolution. The silver-cheeked toadfish (Lagocephalus sceleratus) is a well-known “invasive sprinter” that has invaded and spread, in less than a decade, throughout the Eastern and part of the Western Mediterranean Sea from the Red Sea through the Suez Canal. In this study, we built and analysed the first near-chromosome level genome assembly of L. sceleratus and explored its evolutionary landscape. Through a phylogenomic analysis, we positioned L. sceleratus closer to T. nigroviridis, compared to other members of the family, while gene family evolution analysis revealed that genes associated with the immune response have experienced rapid expansion, providing a genetic basis for studying how L. sceleratus is able to achieve highly successful colonisation. Moreover, we found that voltage-gated sodium channel (NaV 1.4) mutations previously connected to tetrodotoxin resistance in other pufferfishes are not found in L. sceleratus, highlighting the complex evolution of this trait. The high-quality genome assembly built here is expected to set the ground for future studies on the species biology. |
format | Online Article Text |
id | pubmed-8692874 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-86928742021-12-23 Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader Danis, Theodoros Papadogiannis, Vasileios Tsakogiannis, Alexandros Kristoffersen, Jon B. Golani, Daniel Tsaparis, Dimitris Sterioti, Aspasia Kasapidis, Panagiotis Kotoulas, Georgios Magoulas, Antonios Tsigenopoulos, Costas S. Manousaki, Tereza Front Genet Genetics The Tetraodontidae family encompasses several species which attract scientific interest in terms of their ecology and evolution. The silver-cheeked toadfish (Lagocephalus sceleratus) is a well-known “invasive sprinter” that has invaded and spread, in less than a decade, throughout the Eastern and part of the Western Mediterranean Sea from the Red Sea through the Suez Canal. In this study, we built and analysed the first near-chromosome level genome assembly of L. sceleratus and explored its evolutionary landscape. Through a phylogenomic analysis, we positioned L. sceleratus closer to T. nigroviridis, compared to other members of the family, while gene family evolution analysis revealed that genes associated with the immune response have experienced rapid expansion, providing a genetic basis for studying how L. sceleratus is able to achieve highly successful colonisation. Moreover, we found that voltage-gated sodium channel (NaV 1.4) mutations previously connected to tetrodotoxin resistance in other pufferfishes are not found in L. sceleratus, highlighting the complex evolution of this trait. The high-quality genome assembly built here is expected to set the ground for future studies on the species biology. Frontiers Media S.A. 2021-12-08 /pmc/articles/PMC8692874/ /pubmed/34956332 http://dx.doi.org/10.3389/fgene.2021.790850 Text en Copyright © 2021 Danis, Papadogiannis, Tsakogiannis, Kristoffersen, Golani, Tsaparis, Sterioti, Kasapidis, Kotoulas, Magoulas, Tsigenopoulos and Manousaki. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Danis, Theodoros Papadogiannis, Vasileios Tsakogiannis, Alexandros Kristoffersen, Jon B. Golani, Daniel Tsaparis, Dimitris Sterioti, Aspasia Kasapidis, Panagiotis Kotoulas, Georgios Magoulas, Antonios Tsigenopoulos, Costas S. Manousaki, Tereza Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader |
title | Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader |
title_full | Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader |
title_fullStr | Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader |
title_full_unstemmed | Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader |
title_short | Genome Analysis of Lagocephalus sceleratus: Unraveling the Genomic Landscape of a Successful Invader |
title_sort | genome analysis of lagocephalus sceleratus: unraveling the genomic landscape of a successful invader |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8692874/ https://www.ncbi.nlm.nih.gov/pubmed/34956332 http://dx.doi.org/10.3389/fgene.2021.790850 |
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