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A library of induced pluripotent stem cells from clinically well-characterized, diverse healthy human individuals
A library of well-characterized human induced pluripotent stem cell (hiPSC) lines from clinically healthy human subjects could serve as a useful resource of normal controls for in vitro human development, disease modeling, genotype-phenotype association studies, and drug response evaluation. We repo...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8693622/ https://www.ncbi.nlm.nih.gov/pubmed/34739849 http://dx.doi.org/10.1016/j.stemcr.2021.10.005 |
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author | Schaniel, Christoph Dhanan, Priyanka Hu, Bin Xiong, Yuguang Raghunandan, Teeya Gonzalez, David M. Dariolli, Rafael D'Souza, Sunita L. Yadaw, Arjun S. Hansen, Jens Jayaraman, Gomathi Mathew, Bino Machado, Moara Berger, Seth I. Tripodi, Joseph Najfeld, Vesna Garg, Jalaj Miller, Marc Surlyn, Colleen S. Michelis, Katherine C. Tangirala, Neelima C. Weerahandi, Himali Thomas, David C. Beaumont, Kristin G. Sebra, Robert Mahajan, Milind Schadt, Eric Vidovic, Dusica Schürer, Stephan C. Goldfarb, Joseph Azeloglu, Evren U. Birtwistle, Marc R. Sobie, Eric A. Kovacic, Jason C. Dubois, Nicole C. Iyengar, Ravi |
author_facet | Schaniel, Christoph Dhanan, Priyanka Hu, Bin Xiong, Yuguang Raghunandan, Teeya Gonzalez, David M. Dariolli, Rafael D'Souza, Sunita L. Yadaw, Arjun S. Hansen, Jens Jayaraman, Gomathi Mathew, Bino Machado, Moara Berger, Seth I. Tripodi, Joseph Najfeld, Vesna Garg, Jalaj Miller, Marc Surlyn, Colleen S. Michelis, Katherine C. Tangirala, Neelima C. Weerahandi, Himali Thomas, David C. Beaumont, Kristin G. Sebra, Robert Mahajan, Milind Schadt, Eric Vidovic, Dusica Schürer, Stephan C. Goldfarb, Joseph Azeloglu, Evren U. Birtwistle, Marc R. Sobie, Eric A. Kovacic, Jason C. Dubois, Nicole C. Iyengar, Ravi |
author_sort | Schaniel, Christoph |
collection | PubMed |
description | A library of well-characterized human induced pluripotent stem cell (hiPSC) lines from clinically healthy human subjects could serve as a useful resource of normal controls for in vitro human development, disease modeling, genotype-phenotype association studies, and drug response evaluation. We report generation and extensive characterization of a gender-balanced, racially/ethnically diverse library of hiPSC lines from 40 clinically healthy human individuals who range in age from 22 to 61 years. The hiPSCs match the karyotype and short tandem repeat identities of their parental fibroblasts, and have a transcription profile characteristic of pluripotent stem cells. We provide whole-genome sequencing data for one hiPSC clone from each individual, genomic ancestry determination, and analysis of mendelian disease genes and risks. We document similar transcriptomic profiles, single-cell RNA-sequencing-derived cell clusters, and physiology of cardiomyocytes differentiated from multiple independent hiPSC lines. This extensive characterization makes this hiPSC library a valuable resource for many studies on human biology. |
format | Online Article Text |
id | pubmed-8693622 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-86936222022-01-04 A library of induced pluripotent stem cells from clinically well-characterized, diverse healthy human individuals Schaniel, Christoph Dhanan, Priyanka Hu, Bin Xiong, Yuguang Raghunandan, Teeya Gonzalez, David M. Dariolli, Rafael D'Souza, Sunita L. Yadaw, Arjun S. Hansen, Jens Jayaraman, Gomathi Mathew, Bino Machado, Moara Berger, Seth I. Tripodi, Joseph Najfeld, Vesna Garg, Jalaj Miller, Marc Surlyn, Colleen S. Michelis, Katherine C. Tangirala, Neelima C. Weerahandi, Himali Thomas, David C. Beaumont, Kristin G. Sebra, Robert Mahajan, Milind Schadt, Eric Vidovic, Dusica Schürer, Stephan C. Goldfarb, Joseph Azeloglu, Evren U. Birtwistle, Marc R. Sobie, Eric A. Kovacic, Jason C. Dubois, Nicole C. Iyengar, Ravi Stem Cell Reports Resource A library of well-characterized human induced pluripotent stem cell (hiPSC) lines from clinically healthy human subjects could serve as a useful resource of normal controls for in vitro human development, disease modeling, genotype-phenotype association studies, and drug response evaluation. We report generation and extensive characterization of a gender-balanced, racially/ethnically diverse library of hiPSC lines from 40 clinically healthy human individuals who range in age from 22 to 61 years. The hiPSCs match the karyotype and short tandem repeat identities of their parental fibroblasts, and have a transcription profile characteristic of pluripotent stem cells. We provide whole-genome sequencing data for one hiPSC clone from each individual, genomic ancestry determination, and analysis of mendelian disease genes and risks. We document similar transcriptomic profiles, single-cell RNA-sequencing-derived cell clusters, and physiology of cardiomyocytes differentiated from multiple independent hiPSC lines. This extensive characterization makes this hiPSC library a valuable resource for many studies on human biology. Elsevier 2021-11-04 /pmc/articles/PMC8693622/ /pubmed/34739849 http://dx.doi.org/10.1016/j.stemcr.2021.10.005 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Resource Schaniel, Christoph Dhanan, Priyanka Hu, Bin Xiong, Yuguang Raghunandan, Teeya Gonzalez, David M. Dariolli, Rafael D'Souza, Sunita L. Yadaw, Arjun S. Hansen, Jens Jayaraman, Gomathi Mathew, Bino Machado, Moara Berger, Seth I. Tripodi, Joseph Najfeld, Vesna Garg, Jalaj Miller, Marc Surlyn, Colleen S. Michelis, Katherine C. Tangirala, Neelima C. Weerahandi, Himali Thomas, David C. Beaumont, Kristin G. Sebra, Robert Mahajan, Milind Schadt, Eric Vidovic, Dusica Schürer, Stephan C. Goldfarb, Joseph Azeloglu, Evren U. Birtwistle, Marc R. Sobie, Eric A. Kovacic, Jason C. Dubois, Nicole C. Iyengar, Ravi A library of induced pluripotent stem cells from clinically well-characterized, diverse healthy human individuals |
title | A library of induced pluripotent stem cells from clinically well-characterized, diverse healthy human individuals |
title_full | A library of induced pluripotent stem cells from clinically well-characterized, diverse healthy human individuals |
title_fullStr | A library of induced pluripotent stem cells from clinically well-characterized, diverse healthy human individuals |
title_full_unstemmed | A library of induced pluripotent stem cells from clinically well-characterized, diverse healthy human individuals |
title_short | A library of induced pluripotent stem cells from clinically well-characterized, diverse healthy human individuals |
title_sort | library of induced pluripotent stem cells from clinically well-characterized, diverse healthy human individuals |
topic | Resource |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8693622/ https://www.ncbi.nlm.nih.gov/pubmed/34739849 http://dx.doi.org/10.1016/j.stemcr.2021.10.005 |
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