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Binding free energy of protein/ligand complexes calculated using dissociation Parallel Cascade Selection Molecular Dynamics and Markov state model
We recently proposed a computational procedure to simulate the dissociation of protein/ligand complexes using the dissociation Parallel Cascade Selection Molecular Dynamics simulation (dPaCS-MD) method and to analyze the generated trajectories using the Markov state model (MSM). This procedure, call...
Autores principales: | Hata, Hiroaki, Phuoc Tran, Duy, Marzouk Sobeh, Mohamed, Kitao, Akio |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Biophysical Society of Japan
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8694779/ https://www.ncbi.nlm.nih.gov/pubmed/35178333 http://dx.doi.org/10.2142/biophysico.bppb-v18.037 |
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