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Development of a neuron model based on DNAzyme regulation

Neural networks based on DNA molecular circuits play an important role in molecular information processing and artificial intelligence systems. In fact, some DNA molecular systems can become dynamic units with the assistance of DNAzymes. The complex DNA circuits can spontaneously induce correspondin...

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Autores principales: Chen, Cong, Wu, Ranfeng, Wang, Bin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8695483/
https://www.ncbi.nlm.nih.gov/pubmed/35423534
http://dx.doi.org/10.1039/d0ra10515e
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author Chen, Cong
Wu, Ranfeng
Wang, Bin
author_facet Chen, Cong
Wu, Ranfeng
Wang, Bin
author_sort Chen, Cong
collection PubMed
description Neural networks based on DNA molecular circuits play an important role in molecular information processing and artificial intelligence systems. In fact, some DNA molecular systems can become dynamic units with the assistance of DNAzymes. The complex DNA circuits can spontaneously induce corresponding feedback behaviors when their inputs changed. However, most of the reported DNA neural networks have been implemented by the toehold-mediated strand displacement (TMSD) method. Therefore, it was important to develop a method to build a neural network utilizing the TMSD mechanism and adding a mechanism to account for modulation by DNAzymes. In this study, we designed a model of a DNA neuron controlled by DNAzymes. We proposed an approach based on the DNAzyme modulation of neuronal function, combing two reaction mechanisms: DNAzyme digestion and TMSD. Using the DNAzyme adjustment, each component simulating the characteristics of neurons was constructed. By altering the input and weight of the neuron model, we verified the correctness of the computational function of the neurons. Furthermore, in order to verify the application potential of the neurons in specific functions, a voting machine was successfully implemented. The proposed neuron model regulated by DNAzymes was simple to construct and possesses strong scalability, having great potential for use in the construction of large neural networks.
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spelling pubmed-86954832022-04-13 Development of a neuron model based on DNAzyme regulation Chen, Cong Wu, Ranfeng Wang, Bin RSC Adv Chemistry Neural networks based on DNA molecular circuits play an important role in molecular information processing and artificial intelligence systems. In fact, some DNA molecular systems can become dynamic units with the assistance of DNAzymes. The complex DNA circuits can spontaneously induce corresponding feedback behaviors when their inputs changed. However, most of the reported DNA neural networks have been implemented by the toehold-mediated strand displacement (TMSD) method. Therefore, it was important to develop a method to build a neural network utilizing the TMSD mechanism and adding a mechanism to account for modulation by DNAzymes. In this study, we designed a model of a DNA neuron controlled by DNAzymes. We proposed an approach based on the DNAzyme modulation of neuronal function, combing two reaction mechanisms: DNAzyme digestion and TMSD. Using the DNAzyme adjustment, each component simulating the characteristics of neurons was constructed. By altering the input and weight of the neuron model, we verified the correctness of the computational function of the neurons. Furthermore, in order to verify the application potential of the neurons in specific functions, a voting machine was successfully implemented. The proposed neuron model regulated by DNAzymes was simple to construct and possesses strong scalability, having great potential for use in the construction of large neural networks. The Royal Society of Chemistry 2021-03-08 /pmc/articles/PMC8695483/ /pubmed/35423534 http://dx.doi.org/10.1039/d0ra10515e Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Chen, Cong
Wu, Ranfeng
Wang, Bin
Development of a neuron model based on DNAzyme regulation
title Development of a neuron model based on DNAzyme regulation
title_full Development of a neuron model based on DNAzyme regulation
title_fullStr Development of a neuron model based on DNAzyme regulation
title_full_unstemmed Development of a neuron model based on DNAzyme regulation
title_short Development of a neuron model based on DNAzyme regulation
title_sort development of a neuron model based on dnazyme regulation
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8695483/
https://www.ncbi.nlm.nih.gov/pubmed/35423534
http://dx.doi.org/10.1039/d0ra10515e
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