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Development of a neuron model based on DNAzyme regulation
Neural networks based on DNA molecular circuits play an important role in molecular information processing and artificial intelligence systems. In fact, some DNA molecular systems can become dynamic units with the assistance of DNAzymes. The complex DNA circuits can spontaneously induce correspondin...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8695483/ https://www.ncbi.nlm.nih.gov/pubmed/35423534 http://dx.doi.org/10.1039/d0ra10515e |
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author | Chen, Cong Wu, Ranfeng Wang, Bin |
author_facet | Chen, Cong Wu, Ranfeng Wang, Bin |
author_sort | Chen, Cong |
collection | PubMed |
description | Neural networks based on DNA molecular circuits play an important role in molecular information processing and artificial intelligence systems. In fact, some DNA molecular systems can become dynamic units with the assistance of DNAzymes. The complex DNA circuits can spontaneously induce corresponding feedback behaviors when their inputs changed. However, most of the reported DNA neural networks have been implemented by the toehold-mediated strand displacement (TMSD) method. Therefore, it was important to develop a method to build a neural network utilizing the TMSD mechanism and adding a mechanism to account for modulation by DNAzymes. In this study, we designed a model of a DNA neuron controlled by DNAzymes. We proposed an approach based on the DNAzyme modulation of neuronal function, combing two reaction mechanisms: DNAzyme digestion and TMSD. Using the DNAzyme adjustment, each component simulating the characteristics of neurons was constructed. By altering the input and weight of the neuron model, we verified the correctness of the computational function of the neurons. Furthermore, in order to verify the application potential of the neurons in specific functions, a voting machine was successfully implemented. The proposed neuron model regulated by DNAzymes was simple to construct and possesses strong scalability, having great potential for use in the construction of large neural networks. |
format | Online Article Text |
id | pubmed-8695483 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-86954832022-04-13 Development of a neuron model based on DNAzyme regulation Chen, Cong Wu, Ranfeng Wang, Bin RSC Adv Chemistry Neural networks based on DNA molecular circuits play an important role in molecular information processing and artificial intelligence systems. In fact, some DNA molecular systems can become dynamic units with the assistance of DNAzymes. The complex DNA circuits can spontaneously induce corresponding feedback behaviors when their inputs changed. However, most of the reported DNA neural networks have been implemented by the toehold-mediated strand displacement (TMSD) method. Therefore, it was important to develop a method to build a neural network utilizing the TMSD mechanism and adding a mechanism to account for modulation by DNAzymes. In this study, we designed a model of a DNA neuron controlled by DNAzymes. We proposed an approach based on the DNAzyme modulation of neuronal function, combing two reaction mechanisms: DNAzyme digestion and TMSD. Using the DNAzyme adjustment, each component simulating the characteristics of neurons was constructed. By altering the input and weight of the neuron model, we verified the correctness of the computational function of the neurons. Furthermore, in order to verify the application potential of the neurons in specific functions, a voting machine was successfully implemented. The proposed neuron model regulated by DNAzymes was simple to construct and possesses strong scalability, having great potential for use in the construction of large neural networks. The Royal Society of Chemistry 2021-03-08 /pmc/articles/PMC8695483/ /pubmed/35423534 http://dx.doi.org/10.1039/d0ra10515e Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Chen, Cong Wu, Ranfeng Wang, Bin Development of a neuron model based on DNAzyme regulation |
title | Development of a neuron model based on DNAzyme regulation |
title_full | Development of a neuron model based on DNAzyme regulation |
title_fullStr | Development of a neuron model based on DNAzyme regulation |
title_full_unstemmed | Development of a neuron model based on DNAzyme regulation |
title_short | Development of a neuron model based on DNAzyme regulation |
title_sort | development of a neuron model based on dnazyme regulation |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8695483/ https://www.ncbi.nlm.nih.gov/pubmed/35423534 http://dx.doi.org/10.1039/d0ra10515e |
work_keys_str_mv | AT chencong developmentofaneuronmodelbasedondnazymeregulation AT wuranfeng developmentofaneuronmodelbasedondnazymeregulation AT wangbin developmentofaneuronmodelbasedondnazymeregulation |