Cargando…

Whole-Genome Sequencing-Based Antimicrobial Resistance Characterization and Phylogenomic Investigation of 19 Multidrug-Resistant and Extended-Spectrum Beta-Lactamase-Positive Escherichia coli Strains Collected From Hospital Patients in Benin in 2019

The increasing worldwide prevalence of extended-spectrum beta-lactamase (ESBL) producing Escherichia coli constitutes a serious threat to global public health. Surgical site infections are associated with high morbidity and mortality rates in developing countries, fueled by the limited availability...

Descripción completa

Detalles Bibliográficos
Autores principales:	Yehouenou, Carine Laurence, Bogaerts, Bert, De Keersmaecker, Sigrid C. J., Roosens, Nancy H. C., Marchal, Kathleen, Tchiakpe, Edmond, Affolabi, Dissou, Simon, Anne, Dossou, Francis Moise, Vanneste, Kevin, Dalleur, Olivia
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2021
Materias:	Microbiology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8695880/ https://www.ncbi.nlm.nih.gov/pubmed/34956117 http://dx.doi.org/10.3389/fmicb.2021.752883

Ejemplares similares

Whole-Genome Sequencing-Based Screening of MRSA in Patients and Healthcare Workers in Public Hospitals in Benin
por: Laurence Yehouenou, Carine, et al.
Publicado: (2023)

First detection of a plasmid-encoded New-Delhi metallo-beta-lactamase-1 (NDM-1) producing Acinetobacter baumannii using whole genome sequencing, isolated in a clinical setting in Benin
por: Yehouenou, Carine, et al.
Publicado: (2021)

Antimicrobial resistance in hospitalized surgical patients: a silently emerging public health concern in Benin
por: Yehouenou, Carine Laurence, et al.
Publicado: (2020)

Carbapenem-Resistant Organisms Isolated in Surgical Site Infections in Benin: A Public Health Problem
por: Yehouenou, Carine Laurence, et al.
Publicado: (2022)

Phylogenomic Investigation of Increasing Fluoroquinolone Resistance among Belgian Cases of Shigellosis between 2013 and 2018 Indicates Both Travel-Related Imports and Domestic Circulation
por: Bogaerts, Bert, et al.
Publicado: (2021)

Understanding Hand Hygiene Behavior in a Public Hospital in Benin Using the Theoretical Domain Frameworks: The First Step for Designing Appropriate Interventions
por: Yehouenou, Carine Laurence, et al.
Publicado: (2022)

Assessment of the Biosafety and Biosecurity in the Reference Veterinary Laboratory of Parakou in Benin
por: Sodjinou, Vincent Dossou, et al.
Publicado: (2021)

Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination
por: Berbers, Bas, et al.
Publicado: (2020)

Hand hygiene in surgery in Benin: opportunities and challenges
por: Yehouenou, Carine Laurence, et al.
Publicado: (2020)

Possible Outbreak of Streptomycin-Resistant Mycobacterium tuberculosis Beijing in Benin
por: Affolabi, Dissou, et al.
Publicado: (2009)

Blood culture surveillance in a secondary care hospital in Benin: epidemiology of bloodstream infection pathogens and antimicrobial resistance
por: Ombelet, Sien, et al.
Publicado: (2022)

Development of a portable on-site applicable metagenomic data generation workflow for enhanced pathogen and antimicrobial resistance surveillance
por: Bloemen, Bram, et al.
Publicado: (2023)

Using a combination of short- and long-read sequencing to investigate the diversity in plasmid- and chromosomally encoded extended-spectrum beta-lactamases (ESBLs) in clinical Shigella and Salmonella isolates in Belgium
por: Berbers, Bas, et al.
Publicado: (2023)

Evaluation of WGS performance for bacterial pathogen characterization with the Illumina technology optimized for time-critical situations
por: Bogaerts, Bert, et al.
Publicado: (2021)

Whole-genome-based phylogenomic analysis of the Belgian 2016–2017 influenza A(H3N2) outbreak season allows improved surveillance
por: Van Poelvoorde, Laura A. E., et al.
Publicado: (2021)

Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates
por: Nouws, Stéphanie, et al.
Publicado: (2020)

Whole Genome Sequencing Provides an Added Value to the Investigation of Staphylococcal Food Poisoning Outbreaks
por: Nouws, Stéphanie, et al.
Publicado: (2021)

Isolation of Drug-Resistant Gallibacterium anatis from Calves with Unresponsive Bronchopneumonia, Belgium
por: Van Driessche, Laura, et al.
Publicado: (2020)

Transforming Shiga toxin-producing Escherichia coli surveillance through whole genome sequencing in food safety practices
por: Nouws, Stéphanie, et al.
Publicado: (2023)

Characterization of Genetically Modified Microorganisms Using Short- and Long-Read Whole-Genome Sequencing Reveals Contaminations of Related Origin in Multiple Commercial Food Enzyme Products
por: D’aes, Jolien, et al.
Publicado: (2021)

Whole-Genome Sequence Approach and Phylogenomic Stratification Improve the Association Analysis of Mutations With Patient Data in Influenza Surveillance
por: Van Poelvoorde, Laura, et al.
Publicado: (2022)

Case Report: Multidrug Resistant Raoultella ornithinolytica in a Septicemic Calf
por: Pas, Mathilde L., et al.
Publicado: (2021)

Healthcare Professionals’ Knowledge and Beliefs on Antibiotic Prophylaxis in Cesarean Section: A Mixed-Methods Study in Benin
por: Dohou, Angèle Modupè, et al.
Publicado: (2022)

Shifting national surveillance of Shigella infections toward geno‐serotyping by the development of a tailored Luminex assay and NGS workflow
por: Ventola, Eleonora, et al.
Publicado: (2019)

Metagenomic Characterization of Multiple Genetically Modified Bacillus Contaminations in Commercial Microbial Fermentation Products
por: D’aes, Jolien, et al.
Publicado: (2022)

Operational research within the national tuberculosis control programme in Benin
por: Ade, Serge, et al.
Publicado: (2017)

The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country
por: Nouws, Stéphanie, et al.
Publicado: (2020)

Antibiotic Usage in Patients Having Undergone Caesarean Section: A Three-Level Study in Benin
por: Dohou, Angèle Modupè, et al.
Publicado: (2022)

Combining short and long read sequencing to characterize antimicrobial resistance genes on plasmids applied to an unauthorized genetically modified Bacillus
por: Berbers, Bas, et al.
Publicado: (2020)

Characteristics and Treatment Outcomes of Retreatment Tuberculosis Patients in Benin
por: Ade, Serge, et al.
Publicado: (2016)

Identification of an unauthorized genetically modified bacteria in food enzyme through whole-genome sequencing
por: Fraiture, Marie-Alice, et al.
Publicado: (2020)

Large diversity of linezolid-resistant isolates discovered in food-producing animals through linezolid selective monitoring in Belgium in 2019
por: Timmermans, Michaël, et al.
Publicado: (2021)

A Bioinformatics Whole-Genome Sequencing Workflow for Clinical Mycobacterium tuberculosis Complex Isolate Analysis, Validated Using a Reference Collection Extensively Characterized with Conventional Methods and In Silico Approaches
por: Bogaerts, Bert, et al.
Publicado: (2021)

Targeting the 16S rRNA Gene for Bacterial Identification in Complex Mixed Samples: Comparative Evaluation of Second (Illumina) and Third (Oxford Nanopore Technologies) Generation Sequencing Technologies
por: Winand, Raf, et al.
Publicado: (2019)

Validation strategy of a bioinformatics whole genome sequencing workflow for Shiga toxin-producing Escherichia coli using a reference collection extensively characterized with conventional methods
por: Bogaerts, Bert, et al.
Publicado: (2021)

Buruli Ulcer Prevalence and Altitude, Benin
por: Sopoh, Ghislain Emmanuel, et al.
Publicado: (2011)

Moderate rate of transmitted resistance mutations to antiretrovirals and genetic diversity in newly HIV-1 patients diagnosed in Benin
por: Tchiakpe, Edmond, et al.
Publicado: (2020)

Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B(2) products sold on the Belgian market using whole-genome sequencing
por: Bogaerts, Bert, et al.
Publicado: (2023)

Follow-up and tracing of tuberculosis patients who fail to attend their scheduled appointments in Cotonou, Benin: a retrospective cohort study
por: Ade, Serge, et al.
Publicado: (2016)

First Insight into a Nationwide Genotypic Diversity of Mycobacterium tuberculosis among Previously Treated Pulmonary Tuberculosis Cases in Benin, West Africa
por: Affolabi, Dissou, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_2g4o53ugfo9vs45bee48qvd6gf