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Combination of Multiple Microsatellite Analysis and Genome-Wide SNP Genotyping Helps to Solve Wildlife Crime: A Case Study of Poaching of a Caucasian tur (Capra caucasica) in Russian Mountain National Park

SIMPLE SUMMARY: DNA molecular techniques, including multiple microsatellite analysis and genome-wide SNP-genotyping, were used to unlock and prove the poaching of wild goats (Capra caucasica) in an area of the Caucasian mountains in Russia. ABSTRACT: Poaching is one of the major types of wildlife cr...

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Autores principales: Rodionov, Andrey, Deniskova, Tatiana, Dotsev, Arsen, Volkova, Valeria, Petrov, Sergey, Kharzinova, Veronika, Koshkina, Olga, Abdelmanova, Alexandra, Solovieva, Anastasia, Shakhin, Alexey, Bardukov, Nikolay, Zinovieva, Natalia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8697997/
https://www.ncbi.nlm.nih.gov/pubmed/34944192
http://dx.doi.org/10.3390/ani11123416
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author Rodionov, Andrey
Deniskova, Tatiana
Dotsev, Arsen
Volkova, Valeria
Petrov, Sergey
Kharzinova, Veronika
Koshkina, Olga
Abdelmanova, Alexandra
Solovieva, Anastasia
Shakhin, Alexey
Bardukov, Nikolay
Zinovieva, Natalia
author_facet Rodionov, Andrey
Deniskova, Tatiana
Dotsev, Arsen
Volkova, Valeria
Petrov, Sergey
Kharzinova, Veronika
Koshkina, Olga
Abdelmanova, Alexandra
Solovieva, Anastasia
Shakhin, Alexey
Bardukov, Nikolay
Zinovieva, Natalia
author_sort Rodionov, Andrey
collection PubMed
description SIMPLE SUMMARY: DNA molecular techniques, including multiple microsatellite analysis and genome-wide SNP-genotyping, were used to unlock and prove the poaching of wild goats (Capra caucasica) in an area of the Caucasian mountains in Russia. ABSTRACT: Poaching is one of the major types of wildlife crime in Russia. Remnants of goats (presumably the wild endemic species, the Caucasian tur) were found in an area of the Caucasian mountains. The case study involves a suspected poacher whose vehicle was found to have two duffel bags containing pieces of a carcass, which he claimed was that of a goat from his flock. The aim of the forensic genetic analysis for this case was to (i) establish individual identity and (ii) perform species identification. DNA typing based on fourteen microsatellites revealed that STR-genotypes generated from pieces of evidence found at crime scene fully matched those obtained from the evidence seized from the suspect. The results of genome-wide SNP-genotyping, using Illumina Goat SNP50 BeadChip, provided evidence that the poached animal was a wild Caucasian tur (Capra caucasica). Thus, based on comprehensive molecular genetic analysis, evidence of poaching was obtained and sent to local authorities. To our knowledge, this case study is the first to attempt to use DNA chips in wildlife forensics of ungulates.
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spelling pubmed-86979972021-12-24 Combination of Multiple Microsatellite Analysis and Genome-Wide SNP Genotyping Helps to Solve Wildlife Crime: A Case Study of Poaching of a Caucasian tur (Capra caucasica) in Russian Mountain National Park Rodionov, Andrey Deniskova, Tatiana Dotsev, Arsen Volkova, Valeria Petrov, Sergey Kharzinova, Veronika Koshkina, Olga Abdelmanova, Alexandra Solovieva, Anastasia Shakhin, Alexey Bardukov, Nikolay Zinovieva, Natalia Animals (Basel) Article SIMPLE SUMMARY: DNA molecular techniques, including multiple microsatellite analysis and genome-wide SNP-genotyping, were used to unlock and prove the poaching of wild goats (Capra caucasica) in an area of the Caucasian mountains in Russia. ABSTRACT: Poaching is one of the major types of wildlife crime in Russia. Remnants of goats (presumably the wild endemic species, the Caucasian tur) were found in an area of the Caucasian mountains. The case study involves a suspected poacher whose vehicle was found to have two duffel bags containing pieces of a carcass, which he claimed was that of a goat from his flock. The aim of the forensic genetic analysis for this case was to (i) establish individual identity and (ii) perform species identification. DNA typing based on fourteen microsatellites revealed that STR-genotypes generated from pieces of evidence found at crime scene fully matched those obtained from the evidence seized from the suspect. The results of genome-wide SNP-genotyping, using Illumina Goat SNP50 BeadChip, provided evidence that the poached animal was a wild Caucasian tur (Capra caucasica). Thus, based on comprehensive molecular genetic analysis, evidence of poaching was obtained and sent to local authorities. To our knowledge, this case study is the first to attempt to use DNA chips in wildlife forensics of ungulates. MDPI 2021-11-30 /pmc/articles/PMC8697997/ /pubmed/34944192 http://dx.doi.org/10.3390/ani11123416 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Rodionov, Andrey
Deniskova, Tatiana
Dotsev, Arsen
Volkova, Valeria
Petrov, Sergey
Kharzinova, Veronika
Koshkina, Olga
Abdelmanova, Alexandra
Solovieva, Anastasia
Shakhin, Alexey
Bardukov, Nikolay
Zinovieva, Natalia
Combination of Multiple Microsatellite Analysis and Genome-Wide SNP Genotyping Helps to Solve Wildlife Crime: A Case Study of Poaching of a Caucasian tur (Capra caucasica) in Russian Mountain National Park
title Combination of Multiple Microsatellite Analysis and Genome-Wide SNP Genotyping Helps to Solve Wildlife Crime: A Case Study of Poaching of a Caucasian tur (Capra caucasica) in Russian Mountain National Park
title_full Combination of Multiple Microsatellite Analysis and Genome-Wide SNP Genotyping Helps to Solve Wildlife Crime: A Case Study of Poaching of a Caucasian tur (Capra caucasica) in Russian Mountain National Park
title_fullStr Combination of Multiple Microsatellite Analysis and Genome-Wide SNP Genotyping Helps to Solve Wildlife Crime: A Case Study of Poaching of a Caucasian tur (Capra caucasica) in Russian Mountain National Park
title_full_unstemmed Combination of Multiple Microsatellite Analysis and Genome-Wide SNP Genotyping Helps to Solve Wildlife Crime: A Case Study of Poaching of a Caucasian tur (Capra caucasica) in Russian Mountain National Park
title_short Combination of Multiple Microsatellite Analysis and Genome-Wide SNP Genotyping Helps to Solve Wildlife Crime: A Case Study of Poaching of a Caucasian tur (Capra caucasica) in Russian Mountain National Park
title_sort combination of multiple microsatellite analysis and genome-wide snp genotyping helps to solve wildlife crime: a case study of poaching of a caucasian tur (capra caucasica) in russian mountain national park
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8697997/
https://www.ncbi.nlm.nih.gov/pubmed/34944192
http://dx.doi.org/10.3390/ani11123416
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