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Online Prediction of Lead Seizures from iEEG Data

We describe a novel system for online prediction of lead seizures from long-term intracranial electroencephalogram (iEEG) recordings for canines with naturally occurring epilepsy. This study adopts new specification of lead seizures, reflecting strong clustering of seizures in observed data. This cl...

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Autores principales: Chen, Hsiang-Han, Shiao, Han-Tai, Cherkassky, Vladimir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8699082/
https://www.ncbi.nlm.nih.gov/pubmed/34942859
http://dx.doi.org/10.3390/brainsci11121554
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author Chen, Hsiang-Han
Shiao, Han-Tai
Cherkassky, Vladimir
author_facet Chen, Hsiang-Han
Shiao, Han-Tai
Cherkassky, Vladimir
author_sort Chen, Hsiang-Han
collection PubMed
description We describe a novel system for online prediction of lead seizures from long-term intracranial electroencephalogram (iEEG) recordings for canines with naturally occurring epilepsy. This study adopts new specification of lead seizures, reflecting strong clustering of seizures in observed data. This clustering results in fewer lead seizures (~7 lead seizures per dog), and hence new challenges for online seizure prediction, that are addressed in the proposed system. In particular, the machine learning part of the system is implemented using the group learning method suitable for modeling sparse and noisy seizure data. In addition, several modifications for the proposed system are introduced to cope with the non-stationarity of a noisy iEEG signal. They include: (1) periodic retraining of the SVM classifier using most recent training data; (2) removing samples with noisy labels from training data; and (3) introducing a new adaptive post-processing technique for combining many predictions made for 20 s windows into a single prediction for a 4 h segment. Application of the proposed system requires only two lead seizures for training the initial model, and results in high prediction performance for all four dogs (with mean 0.84 sensitivity, 0.27 time-in-warning, and 0.78 false-positive rate per day). The proposed system achieves accurate prediction of lead seizures during long-term test periods, 3–16 lead seizures during a 169–364 day test period, whereas earlier studies did not differentiate between lead vs. non-lead seizures and used much shorter test periods (~few days long).
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spelling pubmed-86990822021-12-24 Online Prediction of Lead Seizures from iEEG Data Chen, Hsiang-Han Shiao, Han-Tai Cherkassky, Vladimir Brain Sci Article We describe a novel system for online prediction of lead seizures from long-term intracranial electroencephalogram (iEEG) recordings for canines with naturally occurring epilepsy. This study adopts new specification of lead seizures, reflecting strong clustering of seizures in observed data. This clustering results in fewer lead seizures (~7 lead seizures per dog), and hence new challenges for online seizure prediction, that are addressed in the proposed system. In particular, the machine learning part of the system is implemented using the group learning method suitable for modeling sparse and noisy seizure data. In addition, several modifications for the proposed system are introduced to cope with the non-stationarity of a noisy iEEG signal. They include: (1) periodic retraining of the SVM classifier using most recent training data; (2) removing samples with noisy labels from training data; and (3) introducing a new adaptive post-processing technique for combining many predictions made for 20 s windows into a single prediction for a 4 h segment. Application of the proposed system requires only two lead seizures for training the initial model, and results in high prediction performance for all four dogs (with mean 0.84 sensitivity, 0.27 time-in-warning, and 0.78 false-positive rate per day). The proposed system achieves accurate prediction of lead seizures during long-term test periods, 3–16 lead seizures during a 169–364 day test period, whereas earlier studies did not differentiate between lead vs. non-lead seizures and used much shorter test periods (~few days long). MDPI 2021-11-24 /pmc/articles/PMC8699082/ /pubmed/34942859 http://dx.doi.org/10.3390/brainsci11121554 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Chen, Hsiang-Han
Shiao, Han-Tai
Cherkassky, Vladimir
Online Prediction of Lead Seizures from iEEG Data
title Online Prediction of Lead Seizures from iEEG Data
title_full Online Prediction of Lead Seizures from iEEG Data
title_fullStr Online Prediction of Lead Seizures from iEEG Data
title_full_unstemmed Online Prediction of Lead Seizures from iEEG Data
title_short Online Prediction of Lead Seizures from iEEG Data
title_sort online prediction of lead seizures from ieeg data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8699082/
https://www.ncbi.nlm.nih.gov/pubmed/34942859
http://dx.doi.org/10.3390/brainsci11121554
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