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Characterization of SLC34A2 as a Potential Prognostic Marker of Oncological Diseases
The main goal of this study is to consider SLC34A2 as a potential prognostic marker of oncological diseases using the mutational, expression, and survival data of cancer studies which are publicly available online. We collected data from four databases (cBioPortal, The Cancer Genome Atlas; cBioPorta...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8699446/ https://www.ncbi.nlm.nih.gov/pubmed/34944522 http://dx.doi.org/10.3390/biom11121878 |
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author | Vlasenkova, Ramilia Nurgalieva, Alsina Akberova, Natalia Bogdanov, Mikhail Kiyamova, Ramziya |
author_facet | Vlasenkova, Ramilia Nurgalieva, Alsina Akberova, Natalia Bogdanov, Mikhail Kiyamova, Ramziya |
author_sort | Vlasenkova, Ramilia |
collection | PubMed |
description | The main goal of this study is to consider SLC34A2 as a potential prognostic marker of oncological diseases using the mutational, expression, and survival data of cancer studies which are publicly available online. We collected data from four databases (cBioPortal, The Cancer Genome Atlas; cBioPortal, Genie; International Cancer Genome Consortium; ArrayExpress). In total, 111,283 samples were categorized according to 27 tumor locations. Ninety-nine functionally significant missense mutations and twelve functionally significant indel mutations in SLC34A2 were found. The most frequent mutations were SLC34A2-ROS1, p.T154A, p.P506S/R/L, p.G257A/E/R, p.S318W, p.A396T, p.P410L/S/H, p.S461C, p.A473T/V, and p.Y503H/C/F. The upregulation of SLC34A2 was found in samples of myeloid, bowel, ovarian, and uterine tumors; downregulation was found in tumor samples of breast, liver, lung, and skin cancer tumors. It was found that the life expectancy of breast and thymus cancer patients with an SLC34A2 mutation is lower, and it was revealed that SLC34A2 overexpression reduced the life span of patients with brain, ovarian, and pancreatic tumors. Thereby, for these types of oncological diseases, the mutational profile of SLC34A2 can be a potential prognostic marker for breast and thymus cancers, and the upregulation of SLC34A2 can be a potential prognostic marker for brain, ovarian, and pancreatic cancers. |
format | Online Article Text |
id | pubmed-8699446 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-86994462021-12-24 Characterization of SLC34A2 as a Potential Prognostic Marker of Oncological Diseases Vlasenkova, Ramilia Nurgalieva, Alsina Akberova, Natalia Bogdanov, Mikhail Kiyamova, Ramziya Biomolecules Article The main goal of this study is to consider SLC34A2 as a potential prognostic marker of oncological diseases using the mutational, expression, and survival data of cancer studies which are publicly available online. We collected data from four databases (cBioPortal, The Cancer Genome Atlas; cBioPortal, Genie; International Cancer Genome Consortium; ArrayExpress). In total, 111,283 samples were categorized according to 27 tumor locations. Ninety-nine functionally significant missense mutations and twelve functionally significant indel mutations in SLC34A2 were found. The most frequent mutations were SLC34A2-ROS1, p.T154A, p.P506S/R/L, p.G257A/E/R, p.S318W, p.A396T, p.P410L/S/H, p.S461C, p.A473T/V, and p.Y503H/C/F. The upregulation of SLC34A2 was found in samples of myeloid, bowel, ovarian, and uterine tumors; downregulation was found in tumor samples of breast, liver, lung, and skin cancer tumors. It was found that the life expectancy of breast and thymus cancer patients with an SLC34A2 mutation is lower, and it was revealed that SLC34A2 overexpression reduced the life span of patients with brain, ovarian, and pancreatic tumors. Thereby, for these types of oncological diseases, the mutational profile of SLC34A2 can be a potential prognostic marker for breast and thymus cancers, and the upregulation of SLC34A2 can be a potential prognostic marker for brain, ovarian, and pancreatic cancers. MDPI 2021-12-14 /pmc/articles/PMC8699446/ /pubmed/34944522 http://dx.doi.org/10.3390/biom11121878 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Vlasenkova, Ramilia Nurgalieva, Alsina Akberova, Natalia Bogdanov, Mikhail Kiyamova, Ramziya Characterization of SLC34A2 as a Potential Prognostic Marker of Oncological Diseases |
title | Characterization of SLC34A2 as a Potential Prognostic Marker of Oncological Diseases |
title_full | Characterization of SLC34A2 as a Potential Prognostic Marker of Oncological Diseases |
title_fullStr | Characterization of SLC34A2 as a Potential Prognostic Marker of Oncological Diseases |
title_full_unstemmed | Characterization of SLC34A2 as a Potential Prognostic Marker of Oncological Diseases |
title_short | Characterization of SLC34A2 as a Potential Prognostic Marker of Oncological Diseases |
title_sort | characterization of slc34a2 as a potential prognostic marker of oncological diseases |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8699446/ https://www.ncbi.nlm.nih.gov/pubmed/34944522 http://dx.doi.org/10.3390/biom11121878 |
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