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Cancer-Cell Deep-Learning Classification by Integrating Quantitative-Phase Spatial and Temporal Fluctuations

We present a new classification approach for live cells, integrating together the spatial and temporal fluctuation maps and the quantitative optical thickness map of the cell, as acquired by common-path quantitative-phase dynamic imaging and processed with a deep-learning framework. We demonstrate t...

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Detalles Bibliográficos
Autores principales: Ben Baruch, Shani, Rotman-Nativ, Noa, Baram, Alon, Greenspan, Hayit, Shaked, Natan T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8699730/
https://www.ncbi.nlm.nih.gov/pubmed/34943859
http://dx.doi.org/10.3390/cells10123353
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author Ben Baruch, Shani
Rotman-Nativ, Noa
Baram, Alon
Greenspan, Hayit
Shaked, Natan T.
author_facet Ben Baruch, Shani
Rotman-Nativ, Noa
Baram, Alon
Greenspan, Hayit
Shaked, Natan T.
author_sort Ben Baruch, Shani
collection PubMed
description We present a new classification approach for live cells, integrating together the spatial and temporal fluctuation maps and the quantitative optical thickness map of the cell, as acquired by common-path quantitative-phase dynamic imaging and processed with a deep-learning framework. We demonstrate this approach by classifying between two types of cancer cell lines of different metastatic potential originating from the same patient. It is based on the fact that both the cancer-cell morphology and its mechanical properties, as indicated by the cell temporal and spatial fluctuations, change over the disease progression. We tested different fusion methods for inputting both the morphological optical thickness maps and the coinciding spatio-temporal fluctuation maps of the cells to the classifying network framework. We show that the proposed integrated triple-path deep-learning architecture improves over deep-learning classification that is based only on the cell morphological evaluation via its quantitative optical thickness map, demonstrating the benefit in the acquisition of the cells over time and in extracting their spatio-temporal fluctuation maps, to be used as an input to the classifying deep neural network.
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spelling pubmed-86997302021-12-24 Cancer-Cell Deep-Learning Classification by Integrating Quantitative-Phase Spatial and Temporal Fluctuations Ben Baruch, Shani Rotman-Nativ, Noa Baram, Alon Greenspan, Hayit Shaked, Natan T. Cells Article We present a new classification approach for live cells, integrating together the spatial and temporal fluctuation maps and the quantitative optical thickness map of the cell, as acquired by common-path quantitative-phase dynamic imaging and processed with a deep-learning framework. We demonstrate this approach by classifying between two types of cancer cell lines of different metastatic potential originating from the same patient. It is based on the fact that both the cancer-cell morphology and its mechanical properties, as indicated by the cell temporal and spatial fluctuations, change over the disease progression. We tested different fusion methods for inputting both the morphological optical thickness maps and the coinciding spatio-temporal fluctuation maps of the cells to the classifying network framework. We show that the proposed integrated triple-path deep-learning architecture improves over deep-learning classification that is based only on the cell morphological evaluation via its quantitative optical thickness map, demonstrating the benefit in the acquisition of the cells over time and in extracting their spatio-temporal fluctuation maps, to be used as an input to the classifying deep neural network. MDPI 2021-11-29 /pmc/articles/PMC8699730/ /pubmed/34943859 http://dx.doi.org/10.3390/cells10123353 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ben Baruch, Shani
Rotman-Nativ, Noa
Baram, Alon
Greenspan, Hayit
Shaked, Natan T.
Cancer-Cell Deep-Learning Classification by Integrating Quantitative-Phase Spatial and Temporal Fluctuations
title Cancer-Cell Deep-Learning Classification by Integrating Quantitative-Phase Spatial and Temporal Fluctuations
title_full Cancer-Cell Deep-Learning Classification by Integrating Quantitative-Phase Spatial and Temporal Fluctuations
title_fullStr Cancer-Cell Deep-Learning Classification by Integrating Quantitative-Phase Spatial and Temporal Fluctuations
title_full_unstemmed Cancer-Cell Deep-Learning Classification by Integrating Quantitative-Phase Spatial and Temporal Fluctuations
title_short Cancer-Cell Deep-Learning Classification by Integrating Quantitative-Phase Spatial and Temporal Fluctuations
title_sort cancer-cell deep-learning classification by integrating quantitative-phase spatial and temporal fluctuations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8699730/
https://www.ncbi.nlm.nih.gov/pubmed/34943859
http://dx.doi.org/10.3390/cells10123353
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