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Importance of Adequate qPCR Controls in Infection Control
Respiratory screening assays lacking Sample Adequacy Controls (SAC) may result in inadequate sample quality and thus false negative results. The non-adequate samples might represent a significant proportion of the total performed tests, thus resulting in sub-optimal infection control measures with i...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8700483/ https://www.ncbi.nlm.nih.gov/pubmed/34943608 http://dx.doi.org/10.3390/diagnostics11122373 |
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author | Oughton, Matthew Brukner, Ivan Eintracht, Shaun Papadakis, Andreas I. Spatz, Alan Resendes, Alex |
author_facet | Oughton, Matthew Brukner, Ivan Eintracht, Shaun Papadakis, Andreas I. Spatz, Alan Resendes, Alex |
author_sort | Oughton, Matthew |
collection | PubMed |
description | Respiratory screening assays lacking Sample Adequacy Controls (SAC) may result in inadequate sample quality and thus false negative results. The non-adequate samples might represent a significant proportion of the total performed tests, thus resulting in sub-optimal infection control measures with implications that may be critical during pandemic times. The quantitative sample adequacy threshold can be established empirically, measuring the change in the frequency of positive results, as a function of the numerical value of “sample adequacy”. Establishing a quantitative threshold for SAC requires a big number/volume of tests to be analyzed in order to have a statistically valid result. Herein, we are offering for the first time clear clinical evidence that a subset of results, which did not pass minimal sample adequacy criteria, have a significantly lower frequency of positivity compared with the “adequate” samples. Flagging these results and/or re-sampling them is a mitigation strategy, which can dramatically improve infection control measures. |
format | Online Article Text |
id | pubmed-8700483 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-87004832021-12-24 Importance of Adequate qPCR Controls in Infection Control Oughton, Matthew Brukner, Ivan Eintracht, Shaun Papadakis, Andreas I. Spatz, Alan Resendes, Alex Diagnostics (Basel) Communication Respiratory screening assays lacking Sample Adequacy Controls (SAC) may result in inadequate sample quality and thus false negative results. The non-adequate samples might represent a significant proportion of the total performed tests, thus resulting in sub-optimal infection control measures with implications that may be critical during pandemic times. The quantitative sample adequacy threshold can be established empirically, measuring the change in the frequency of positive results, as a function of the numerical value of “sample adequacy”. Establishing a quantitative threshold for SAC requires a big number/volume of tests to be analyzed in order to have a statistically valid result. Herein, we are offering for the first time clear clinical evidence that a subset of results, which did not pass minimal sample adequacy criteria, have a significantly lower frequency of positivity compared with the “adequate” samples. Flagging these results and/or re-sampling them is a mitigation strategy, which can dramatically improve infection control measures. MDPI 2021-12-16 /pmc/articles/PMC8700483/ /pubmed/34943608 http://dx.doi.org/10.3390/diagnostics11122373 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Communication Oughton, Matthew Brukner, Ivan Eintracht, Shaun Papadakis, Andreas I. Spatz, Alan Resendes, Alex Importance of Adequate qPCR Controls in Infection Control |
title | Importance of Adequate qPCR Controls in Infection Control |
title_full | Importance of Adequate qPCR Controls in Infection Control |
title_fullStr | Importance of Adequate qPCR Controls in Infection Control |
title_full_unstemmed | Importance of Adequate qPCR Controls in Infection Control |
title_short | Importance of Adequate qPCR Controls in Infection Control |
title_sort | importance of adequate qpcr controls in infection control |
topic | Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8700483/ https://www.ncbi.nlm.nih.gov/pubmed/34943608 http://dx.doi.org/10.3390/diagnostics11122373 |
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