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Importance of Adequate qPCR Controls in Infection Control

Respiratory screening assays lacking Sample Adequacy Controls (SAC) may result in inadequate sample quality and thus false negative results. The non-adequate samples might represent a significant proportion of the total performed tests, thus resulting in sub-optimal infection control measures with i...

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Autores principales: Oughton, Matthew, Brukner, Ivan, Eintracht, Shaun, Papadakis, Andreas I., Spatz, Alan, Resendes, Alex
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8700483/
https://www.ncbi.nlm.nih.gov/pubmed/34943608
http://dx.doi.org/10.3390/diagnostics11122373
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author Oughton, Matthew
Brukner, Ivan
Eintracht, Shaun
Papadakis, Andreas I.
Spatz, Alan
Resendes, Alex
author_facet Oughton, Matthew
Brukner, Ivan
Eintracht, Shaun
Papadakis, Andreas I.
Spatz, Alan
Resendes, Alex
author_sort Oughton, Matthew
collection PubMed
description Respiratory screening assays lacking Sample Adequacy Controls (SAC) may result in inadequate sample quality and thus false negative results. The non-adequate samples might represent a significant proportion of the total performed tests, thus resulting in sub-optimal infection control measures with implications that may be critical during pandemic times. The quantitative sample adequacy threshold can be established empirically, measuring the change in the frequency of positive results, as a function of the numerical value of “sample adequacy”. Establishing a quantitative threshold for SAC requires a big number/volume of tests to be analyzed in order to have a statistically valid result. Herein, we are offering for the first time clear clinical evidence that a subset of results, which did not pass minimal sample adequacy criteria, have a significantly lower frequency of positivity compared with the “adequate” samples. Flagging these results and/or re-sampling them is a mitigation strategy, which can dramatically improve infection control measures.
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spelling pubmed-87004832021-12-24 Importance of Adequate qPCR Controls in Infection Control Oughton, Matthew Brukner, Ivan Eintracht, Shaun Papadakis, Andreas I. Spatz, Alan Resendes, Alex Diagnostics (Basel) Communication Respiratory screening assays lacking Sample Adequacy Controls (SAC) may result in inadequate sample quality and thus false negative results. The non-adequate samples might represent a significant proportion of the total performed tests, thus resulting in sub-optimal infection control measures with implications that may be critical during pandemic times. The quantitative sample adequacy threshold can be established empirically, measuring the change in the frequency of positive results, as a function of the numerical value of “sample adequacy”. Establishing a quantitative threshold for SAC requires a big number/volume of tests to be analyzed in order to have a statistically valid result. Herein, we are offering for the first time clear clinical evidence that a subset of results, which did not pass minimal sample adequacy criteria, have a significantly lower frequency of positivity compared with the “adequate” samples. Flagging these results and/or re-sampling them is a mitigation strategy, which can dramatically improve infection control measures. MDPI 2021-12-16 /pmc/articles/PMC8700483/ /pubmed/34943608 http://dx.doi.org/10.3390/diagnostics11122373 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Oughton, Matthew
Brukner, Ivan
Eintracht, Shaun
Papadakis, Andreas I.
Spatz, Alan
Resendes, Alex
Importance of Adequate qPCR Controls in Infection Control
title Importance of Adequate qPCR Controls in Infection Control
title_full Importance of Adequate qPCR Controls in Infection Control
title_fullStr Importance of Adequate qPCR Controls in Infection Control
title_full_unstemmed Importance of Adequate qPCR Controls in Infection Control
title_short Importance of Adequate qPCR Controls in Infection Control
title_sort importance of adequate qpcr controls in infection control
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8700483/
https://www.ncbi.nlm.nih.gov/pubmed/34943608
http://dx.doi.org/10.3390/diagnostics11122373
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