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Kynurenine and Hemoglobin as Sex-Specific Variables in COVID-19 Patients: A Machine Learning and Genetic Algorithms Approach

Differences in clinical manifestations, immune response, metabolic alterations, and outcomes (including disease severity and mortality) between men and women with COVID-19 have been reported since the pandemic outbreak, making it necessary to implement sex-specific biomarkers for disease diagnosis a...

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Autores principales: Celaya-Padilla, Jose M., Villagrana-Bañuelos, Karen E., Oropeza-Valdez, Juan José, Monárrez-Espino, Joel, Castañeda-Delgado, Julio E., Oostdam, Ana Sofía Herrera-Van, Fernández-Ruiz, Julio César, Ochoa-González, Fátima, Borrego, Juan Carlos, Enciso-Moreno, Jose Antonio, López, Jesús Adrián, López-Hernández, Yamilé, Galván-Tejada, Carlos E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8700648/
https://www.ncbi.nlm.nih.gov/pubmed/34943434
http://dx.doi.org/10.3390/diagnostics11122197
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author Celaya-Padilla, Jose M.
Villagrana-Bañuelos, Karen E.
Oropeza-Valdez, Juan José
Monárrez-Espino, Joel
Castañeda-Delgado, Julio E.
Oostdam, Ana Sofía Herrera-Van
Fernández-Ruiz, Julio César
Ochoa-González, Fátima
Borrego, Juan Carlos
Enciso-Moreno, Jose Antonio
López, Jesús Adrián
López-Hernández, Yamilé
Galván-Tejada, Carlos E.
author_facet Celaya-Padilla, Jose M.
Villagrana-Bañuelos, Karen E.
Oropeza-Valdez, Juan José
Monárrez-Espino, Joel
Castañeda-Delgado, Julio E.
Oostdam, Ana Sofía Herrera-Van
Fernández-Ruiz, Julio César
Ochoa-González, Fátima
Borrego, Juan Carlos
Enciso-Moreno, Jose Antonio
López, Jesús Adrián
López-Hernández, Yamilé
Galván-Tejada, Carlos E.
author_sort Celaya-Padilla, Jose M.
collection PubMed
description Differences in clinical manifestations, immune response, metabolic alterations, and outcomes (including disease severity and mortality) between men and women with COVID-19 have been reported since the pandemic outbreak, making it necessary to implement sex-specific biomarkers for disease diagnosis and treatment. This study aimed to identify sex-associated differences in COVID-19 patients by means of a genetic algorithm (GALGO) and machine learning, employing support vector machine (SVM) and logistic regression (LR) for the data analysis. Both algorithms identified kynurenine and hemoglobin as the most important variables to distinguish between men and women with COVID-19. LR and SVM identified C10:1, cough, and lysoPC a 14:0 to discriminate between men with COVID-19 from men without, with LR being the best model. In the case of women with COVID-19 vs. women without, SVM had a higher performance, and both models identified a higher number of variables, including 10:2, lysoPC a C26:0, lysoPC a C28:0, alpha-ketoglutaric acid, lactic acid, cough, fever, anosmia, and dysgeusia. Our results demonstrate that differences in sexes have implications in the diagnosis and outcome of the disease. Further, genetic and machine learning algorithms are useful tools to predict sex-associated differences in COVID-19.
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spelling pubmed-87006482021-12-24 Kynurenine and Hemoglobin as Sex-Specific Variables in COVID-19 Patients: A Machine Learning and Genetic Algorithms Approach Celaya-Padilla, Jose M. Villagrana-Bañuelos, Karen E. Oropeza-Valdez, Juan José Monárrez-Espino, Joel Castañeda-Delgado, Julio E. Oostdam, Ana Sofía Herrera-Van Fernández-Ruiz, Julio César Ochoa-González, Fátima Borrego, Juan Carlos Enciso-Moreno, Jose Antonio López, Jesús Adrián López-Hernández, Yamilé Galván-Tejada, Carlos E. Diagnostics (Basel) Article Differences in clinical manifestations, immune response, metabolic alterations, and outcomes (including disease severity and mortality) between men and women with COVID-19 have been reported since the pandemic outbreak, making it necessary to implement sex-specific biomarkers for disease diagnosis and treatment. This study aimed to identify sex-associated differences in COVID-19 patients by means of a genetic algorithm (GALGO) and machine learning, employing support vector machine (SVM) and logistic regression (LR) for the data analysis. Both algorithms identified kynurenine and hemoglobin as the most important variables to distinguish between men and women with COVID-19. LR and SVM identified C10:1, cough, and lysoPC a 14:0 to discriminate between men with COVID-19 from men without, with LR being the best model. In the case of women with COVID-19 vs. women without, SVM had a higher performance, and both models identified a higher number of variables, including 10:2, lysoPC a C26:0, lysoPC a C28:0, alpha-ketoglutaric acid, lactic acid, cough, fever, anosmia, and dysgeusia. Our results demonstrate that differences in sexes have implications in the diagnosis and outcome of the disease. Further, genetic and machine learning algorithms are useful tools to predict sex-associated differences in COVID-19. MDPI 2021-11-25 /pmc/articles/PMC8700648/ /pubmed/34943434 http://dx.doi.org/10.3390/diagnostics11122197 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Celaya-Padilla, Jose M.
Villagrana-Bañuelos, Karen E.
Oropeza-Valdez, Juan José
Monárrez-Espino, Joel
Castañeda-Delgado, Julio E.
Oostdam, Ana Sofía Herrera-Van
Fernández-Ruiz, Julio César
Ochoa-González, Fátima
Borrego, Juan Carlos
Enciso-Moreno, Jose Antonio
López, Jesús Adrián
López-Hernández, Yamilé
Galván-Tejada, Carlos E.
Kynurenine and Hemoglobin as Sex-Specific Variables in COVID-19 Patients: A Machine Learning and Genetic Algorithms Approach
title Kynurenine and Hemoglobin as Sex-Specific Variables in COVID-19 Patients: A Machine Learning and Genetic Algorithms Approach
title_full Kynurenine and Hemoglobin as Sex-Specific Variables in COVID-19 Patients: A Machine Learning and Genetic Algorithms Approach
title_fullStr Kynurenine and Hemoglobin as Sex-Specific Variables in COVID-19 Patients: A Machine Learning and Genetic Algorithms Approach
title_full_unstemmed Kynurenine and Hemoglobin as Sex-Specific Variables in COVID-19 Patients: A Machine Learning and Genetic Algorithms Approach
title_short Kynurenine and Hemoglobin as Sex-Specific Variables in COVID-19 Patients: A Machine Learning and Genetic Algorithms Approach
title_sort kynurenine and hemoglobin as sex-specific variables in covid-19 patients: a machine learning and genetic algorithms approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8700648/
https://www.ncbi.nlm.nih.gov/pubmed/34943434
http://dx.doi.org/10.3390/diagnostics11122197
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