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Serpin Family E Member 1 Tag Single-Nucleotide Polymorphisms in Patients with Diabetic Nephropathy: An Association Study and Meta-Analysis Using a Genetic Model-Free Approach
Background: Many lines of evidence highlight the genetic contribution on the development of diabetic nephropathy (DN). One of the studied genes is SERPINE1 whose the role in the risk of developing DN remains questionable. In order to elucidate the contribution of SERPINE1 in DN progression in the co...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8701119/ https://www.ncbi.nlm.nih.gov/pubmed/34946835 http://dx.doi.org/10.3390/genes12121887 |
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author | Tziastoudi, Maria Dardiotis, Efthimios Pissas, Georgios Filippidis, Georgios Golfinopoulos, Spyridon Siokas, Vasileios Tachmitzi, Sophia V. Eleftheriadis, Theodoros Hadjigeorgiou, Georgios M. Tsironi, Evangelia Stefanidis, Ioannis |
author_facet | Tziastoudi, Maria Dardiotis, Efthimios Pissas, Georgios Filippidis, Georgios Golfinopoulos, Spyridon Siokas, Vasileios Tachmitzi, Sophia V. Eleftheriadis, Theodoros Hadjigeorgiou, Georgios M. Tsironi, Evangelia Stefanidis, Ioannis |
author_sort | Tziastoudi, Maria |
collection | PubMed |
description | Background: Many lines of evidence highlight the genetic contribution on the development of diabetic nephropathy (DN). One of the studied genes is SERPINE1 whose the role in the risk of developing DN remains questionable. In order to elucidate the contribution of SERPINE1 in DN progression in the context of type 2 diabetes mellitus (T2DM), we conducted an association study and meta-analysis of SERPINE1 genetic variants. Materials and Methods: A total of 190 patients with DN, 150 T2DM (type 2 diabetes mellitus) patients without DN and 238 healthy controls were recruited. We selected five tag single-nucleotide polymorphisms (SNPs) from the HapMap. The generalized odds ratio (OR(G)) was calculated to estimate the risk on DN development. Subgroup analyses based on ethnicity and type of diabetes were also performed. Results: Both the present association study regarding SERPINE1 SNPs (rs2227667, rs2070682, rs1050813, rs2227690, rs2227692) did not found any significant association between SERPINE1 variants and DN and the meta-analysis of variant 4G>5G (rs1799889) did not also reveal a significant association between 4G>5G variant and DN in main and subgroup analyses. Discussion: In conclusion, the present association study and meta-analysis provides strong evidence that SERPINE1 genetic variant 4G>5G is not implicated in the risk or development of DN in Caucasians. Further studies in other populations remain to further investigate the role of this variant in the course of DN. |
format | Online Article Text |
id | pubmed-8701119 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-87011192021-12-24 Serpin Family E Member 1 Tag Single-Nucleotide Polymorphisms in Patients with Diabetic Nephropathy: An Association Study and Meta-Analysis Using a Genetic Model-Free Approach Tziastoudi, Maria Dardiotis, Efthimios Pissas, Georgios Filippidis, Georgios Golfinopoulos, Spyridon Siokas, Vasileios Tachmitzi, Sophia V. Eleftheriadis, Theodoros Hadjigeorgiou, Georgios M. Tsironi, Evangelia Stefanidis, Ioannis Genes (Basel) Article Background: Many lines of evidence highlight the genetic contribution on the development of diabetic nephropathy (DN). One of the studied genes is SERPINE1 whose the role in the risk of developing DN remains questionable. In order to elucidate the contribution of SERPINE1 in DN progression in the context of type 2 diabetes mellitus (T2DM), we conducted an association study and meta-analysis of SERPINE1 genetic variants. Materials and Methods: A total of 190 patients with DN, 150 T2DM (type 2 diabetes mellitus) patients without DN and 238 healthy controls were recruited. We selected five tag single-nucleotide polymorphisms (SNPs) from the HapMap. The generalized odds ratio (OR(G)) was calculated to estimate the risk on DN development. Subgroup analyses based on ethnicity and type of diabetes were also performed. Results: Both the present association study regarding SERPINE1 SNPs (rs2227667, rs2070682, rs1050813, rs2227690, rs2227692) did not found any significant association between SERPINE1 variants and DN and the meta-analysis of variant 4G>5G (rs1799889) did not also reveal a significant association between 4G>5G variant and DN in main and subgroup analyses. Discussion: In conclusion, the present association study and meta-analysis provides strong evidence that SERPINE1 genetic variant 4G>5G is not implicated in the risk or development of DN in Caucasians. Further studies in other populations remain to further investigate the role of this variant in the course of DN. MDPI 2021-11-25 /pmc/articles/PMC8701119/ /pubmed/34946835 http://dx.doi.org/10.3390/genes12121887 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Tziastoudi, Maria Dardiotis, Efthimios Pissas, Georgios Filippidis, Georgios Golfinopoulos, Spyridon Siokas, Vasileios Tachmitzi, Sophia V. Eleftheriadis, Theodoros Hadjigeorgiou, Georgios M. Tsironi, Evangelia Stefanidis, Ioannis Serpin Family E Member 1 Tag Single-Nucleotide Polymorphisms in Patients with Diabetic Nephropathy: An Association Study and Meta-Analysis Using a Genetic Model-Free Approach |
title | Serpin Family E Member 1 Tag Single-Nucleotide Polymorphisms in Patients with Diabetic Nephropathy: An Association Study and Meta-Analysis Using a Genetic Model-Free Approach |
title_full | Serpin Family E Member 1 Tag Single-Nucleotide Polymorphisms in Patients with Diabetic Nephropathy: An Association Study and Meta-Analysis Using a Genetic Model-Free Approach |
title_fullStr | Serpin Family E Member 1 Tag Single-Nucleotide Polymorphisms in Patients with Diabetic Nephropathy: An Association Study and Meta-Analysis Using a Genetic Model-Free Approach |
title_full_unstemmed | Serpin Family E Member 1 Tag Single-Nucleotide Polymorphisms in Patients with Diabetic Nephropathy: An Association Study and Meta-Analysis Using a Genetic Model-Free Approach |
title_short | Serpin Family E Member 1 Tag Single-Nucleotide Polymorphisms in Patients with Diabetic Nephropathy: An Association Study and Meta-Analysis Using a Genetic Model-Free Approach |
title_sort | serpin family e member 1 tag single-nucleotide polymorphisms in patients with diabetic nephropathy: an association study and meta-analysis using a genetic model-free approach |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8701119/ https://www.ncbi.nlm.nih.gov/pubmed/34946835 http://dx.doi.org/10.3390/genes12121887 |
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