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First Description of the Mitogenome and Phylogeny of Culicinae Species from the Amazon Region
The Culicidae family is distributed worldwide and comprises about 3587 species subdivided into the subfamilies Anophelinae and Culicinae. This is the first description of complete mitochondrial DNA sequences from Aedes fluviatilis, Aedeomyia squamipennis, Coquillettidia nigricans, Psorophora albipes...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8701802/ https://www.ncbi.nlm.nih.gov/pubmed/34946932 http://dx.doi.org/10.3390/genes12121983 |
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author | do Nascimento, Bruna Laís Sena da Silva, Fábio Silva Nunes-Neto, Joaquim Pinto de Almeida Medeiros, Daniele Barbosa Cruz, Ana Cecília Ribeiro da Silva, Sandro Patroca da Silva e Silva, Lucas Henrique de Oliveira Monteiro, Hamilton Antônio Dias, Daniel Damous Vieira, Durval Bertram Rodrigues Rosa, José Wilson Brandão, Roberto Carlos Feitosa Chiang, Jannifer Oliveira Martins, Livia Carício da Costa Vasconcelos, Pedro Fernando |
author_facet | do Nascimento, Bruna Laís Sena da Silva, Fábio Silva Nunes-Neto, Joaquim Pinto de Almeida Medeiros, Daniele Barbosa Cruz, Ana Cecília Ribeiro da Silva, Sandro Patroca da Silva e Silva, Lucas Henrique de Oliveira Monteiro, Hamilton Antônio Dias, Daniel Damous Vieira, Durval Bertram Rodrigues Rosa, José Wilson Brandão, Roberto Carlos Feitosa Chiang, Jannifer Oliveira Martins, Livia Carício da Costa Vasconcelos, Pedro Fernando |
author_sort | do Nascimento, Bruna Laís Sena |
collection | PubMed |
description | The Culicidae family is distributed worldwide and comprises about 3587 species subdivided into the subfamilies Anophelinae and Culicinae. This is the first description of complete mitochondrial DNA sequences from Aedes fluviatilis, Aedeomyia squamipennis, Coquillettidia nigricans, Psorophora albipes, and Psorophora ferox. The mitogenomes showed an average length of 15,046 pb and 78.02% AT content, comprising 37 functional subunits (13 protein coding genes, 22 tRNAs, and two rRNAs). The most common start codons were ATT/ATG, and TAA was the stop codon for all PCGs. The tRNAs had the typical leaf clover structure, except tRNA(Ser1). Phylogeny was inferred by analyzing the 13 PCGs concatenated nucleotide sequences of 48 mitogenomes. Maximum likelihood and Bayesian inference analysis placed Ps. albipes and Ps. ferox in the Janthinosoma group, like the accepted classification of Psorophora genus. Ae. fluviatilis was placed in the Aedini tribe, but was revealed to be more related to the Haemagogus genus, a result that may have been hampered by the poor sampling of Aedes sequences. Cq. nigricans clustered with Cq. chrysonotum, both related to Mansonia. Ae. squamipennis was placed as the most external lineage of the Culicinae subfamily. The yielded topology supports the concept of monophyly of all groups and ratifies the current taxonomic classification. |
format | Online Article Text |
id | pubmed-8701802 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-87018022021-12-24 First Description of the Mitogenome and Phylogeny of Culicinae Species from the Amazon Region do Nascimento, Bruna Laís Sena da Silva, Fábio Silva Nunes-Neto, Joaquim Pinto de Almeida Medeiros, Daniele Barbosa Cruz, Ana Cecília Ribeiro da Silva, Sandro Patroca da Silva e Silva, Lucas Henrique de Oliveira Monteiro, Hamilton Antônio Dias, Daniel Damous Vieira, Durval Bertram Rodrigues Rosa, José Wilson Brandão, Roberto Carlos Feitosa Chiang, Jannifer Oliveira Martins, Livia Carício da Costa Vasconcelos, Pedro Fernando Genes (Basel) Article The Culicidae family is distributed worldwide and comprises about 3587 species subdivided into the subfamilies Anophelinae and Culicinae. This is the first description of complete mitochondrial DNA sequences from Aedes fluviatilis, Aedeomyia squamipennis, Coquillettidia nigricans, Psorophora albipes, and Psorophora ferox. The mitogenomes showed an average length of 15,046 pb and 78.02% AT content, comprising 37 functional subunits (13 protein coding genes, 22 tRNAs, and two rRNAs). The most common start codons were ATT/ATG, and TAA was the stop codon for all PCGs. The tRNAs had the typical leaf clover structure, except tRNA(Ser1). Phylogeny was inferred by analyzing the 13 PCGs concatenated nucleotide sequences of 48 mitogenomes. Maximum likelihood and Bayesian inference analysis placed Ps. albipes and Ps. ferox in the Janthinosoma group, like the accepted classification of Psorophora genus. Ae. fluviatilis was placed in the Aedini tribe, but was revealed to be more related to the Haemagogus genus, a result that may have been hampered by the poor sampling of Aedes sequences. Cq. nigricans clustered with Cq. chrysonotum, both related to Mansonia. Ae. squamipennis was placed as the most external lineage of the Culicinae subfamily. The yielded topology supports the concept of monophyly of all groups and ratifies the current taxonomic classification. MDPI 2021-12-14 /pmc/articles/PMC8701802/ /pubmed/34946932 http://dx.doi.org/10.3390/genes12121983 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article do Nascimento, Bruna Laís Sena da Silva, Fábio Silva Nunes-Neto, Joaquim Pinto de Almeida Medeiros, Daniele Barbosa Cruz, Ana Cecília Ribeiro da Silva, Sandro Patroca da Silva e Silva, Lucas Henrique de Oliveira Monteiro, Hamilton Antônio Dias, Daniel Damous Vieira, Durval Bertram Rodrigues Rosa, José Wilson Brandão, Roberto Carlos Feitosa Chiang, Jannifer Oliveira Martins, Livia Carício da Costa Vasconcelos, Pedro Fernando First Description of the Mitogenome and Phylogeny of Culicinae Species from the Amazon Region |
title | First Description of the Mitogenome and Phylogeny of Culicinae Species from the Amazon Region |
title_full | First Description of the Mitogenome and Phylogeny of Culicinae Species from the Amazon Region |
title_fullStr | First Description of the Mitogenome and Phylogeny of Culicinae Species from the Amazon Region |
title_full_unstemmed | First Description of the Mitogenome and Phylogeny of Culicinae Species from the Amazon Region |
title_short | First Description of the Mitogenome and Phylogeny of Culicinae Species from the Amazon Region |
title_sort | first description of the mitogenome and phylogeny of culicinae species from the amazon region |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8701802/ https://www.ncbi.nlm.nih.gov/pubmed/34946932 http://dx.doi.org/10.3390/genes12121983 |
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