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Relevant Characteristics Analysis Using Natural Language Processing and Machine Learning Based on Phenotypes and T-Cell Subsets in Systemic Lupus Erythematosus Patients With Anxiety
Anxiety is frequently observed in patients with systemic lupus erythematosus (SLE) and the immune system could act as a trigger for anxiety. To recognize abnormal T-cell and B-cell subsets for SLE patients with anxiety, in this study, patient disease phenotypes data from electronic lupus symptom rec...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8703039/ https://www.ncbi.nlm.nih.gov/pubmed/34955935 http://dx.doi.org/10.3389/fpsyt.2021.793505 |
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author | Gu, Xi-xi Jin, Yi Fu, Ting Zhang, Xiao-ming Li, Teng Yang, Ying Li, Rong Zhou, Wei Guo, Jia-xin Zhao, Rui Li, Jing-jing Dong, Chen Gu, Zhi-feng |
author_facet | Gu, Xi-xi Jin, Yi Fu, Ting Zhang, Xiao-ming Li, Teng Yang, Ying Li, Rong Zhou, Wei Guo, Jia-xin Zhao, Rui Li, Jing-jing Dong, Chen Gu, Zhi-feng |
author_sort | Gu, Xi-xi |
collection | PubMed |
description | Anxiety is frequently observed in patients with systemic lupus erythematosus (SLE) and the immune system could act as a trigger for anxiety. To recognize abnormal T-cell and B-cell subsets for SLE patients with anxiety, in this study, patient disease phenotypes data from electronic lupus symptom records were extracted by using natural language processing. The Hospital Anxiety and Depression Scale (HADS) was used to distinguish patients, and 107 patients were selected to meet research requirements. Then, peripheral blood was collected from two patient groups for multicolor flow cytometry experiments. The characteristics of 75 T-cell and 15 B-cell subsets were investigated between SLE patients with- (n = 23) and without-anxiety (n = 84) groups by four machine learning methods. The findings showed 13 T-cell subsets were significantly different between the two groups. Furthermore, BMI, fatigue, depression, unstable emotions, CD27(+)CD28(+) Th/Treg, CD27(−)CD28(−) Th/Treg, CD45RA(−)CD27(−) Th, and CD45RA(+)HLADR(+) Th cells may be important characteristics between SLE patients with- and without-anxiety groups. The findings not only point out the difference of T-cell subsets in SLE patients with or without anxiety, but also imply that T cells might play the important role in patients with anxiety disorder. |
format | Online Article Text |
id | pubmed-8703039 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-87030392021-12-25 Relevant Characteristics Analysis Using Natural Language Processing and Machine Learning Based on Phenotypes and T-Cell Subsets in Systemic Lupus Erythematosus Patients With Anxiety Gu, Xi-xi Jin, Yi Fu, Ting Zhang, Xiao-ming Li, Teng Yang, Ying Li, Rong Zhou, Wei Guo, Jia-xin Zhao, Rui Li, Jing-jing Dong, Chen Gu, Zhi-feng Front Psychiatry Psychiatry Anxiety is frequently observed in patients with systemic lupus erythematosus (SLE) and the immune system could act as a trigger for anxiety. To recognize abnormal T-cell and B-cell subsets for SLE patients with anxiety, in this study, patient disease phenotypes data from electronic lupus symptom records were extracted by using natural language processing. The Hospital Anxiety and Depression Scale (HADS) was used to distinguish patients, and 107 patients were selected to meet research requirements. Then, peripheral blood was collected from two patient groups for multicolor flow cytometry experiments. The characteristics of 75 T-cell and 15 B-cell subsets were investigated between SLE patients with- (n = 23) and without-anxiety (n = 84) groups by four machine learning methods. The findings showed 13 T-cell subsets were significantly different between the two groups. Furthermore, BMI, fatigue, depression, unstable emotions, CD27(+)CD28(+) Th/Treg, CD27(−)CD28(−) Th/Treg, CD45RA(−)CD27(−) Th, and CD45RA(+)HLADR(+) Th cells may be important characteristics between SLE patients with- and without-anxiety groups. The findings not only point out the difference of T-cell subsets in SLE patients with or without anxiety, but also imply that T cells might play the important role in patients with anxiety disorder. Frontiers Media S.A. 2021-12-10 /pmc/articles/PMC8703039/ /pubmed/34955935 http://dx.doi.org/10.3389/fpsyt.2021.793505 Text en Copyright © 2021 Gu, Jin, Fu, Zhang, Li, Yang, Li, Zhou, Guo, Zhao, Li, Dong and Gu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Psychiatry Gu, Xi-xi Jin, Yi Fu, Ting Zhang, Xiao-ming Li, Teng Yang, Ying Li, Rong Zhou, Wei Guo, Jia-xin Zhao, Rui Li, Jing-jing Dong, Chen Gu, Zhi-feng Relevant Characteristics Analysis Using Natural Language Processing and Machine Learning Based on Phenotypes and T-Cell Subsets in Systemic Lupus Erythematosus Patients With Anxiety |
title | Relevant Characteristics Analysis Using Natural Language Processing and Machine Learning Based on Phenotypes and T-Cell Subsets in Systemic Lupus Erythematosus Patients With Anxiety |
title_full | Relevant Characteristics Analysis Using Natural Language Processing and Machine Learning Based on Phenotypes and T-Cell Subsets in Systemic Lupus Erythematosus Patients With Anxiety |
title_fullStr | Relevant Characteristics Analysis Using Natural Language Processing and Machine Learning Based on Phenotypes and T-Cell Subsets in Systemic Lupus Erythematosus Patients With Anxiety |
title_full_unstemmed | Relevant Characteristics Analysis Using Natural Language Processing and Machine Learning Based on Phenotypes and T-Cell Subsets in Systemic Lupus Erythematosus Patients With Anxiety |
title_short | Relevant Characteristics Analysis Using Natural Language Processing and Machine Learning Based on Phenotypes and T-Cell Subsets in Systemic Lupus Erythematosus Patients With Anxiety |
title_sort | relevant characteristics analysis using natural language processing and machine learning based on phenotypes and t-cell subsets in systemic lupus erythematosus patients with anxiety |
topic | Psychiatry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8703039/ https://www.ncbi.nlm.nih.gov/pubmed/34955935 http://dx.doi.org/10.3389/fpsyt.2021.793505 |
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