Cargando…
Phylogenetic Reassessment, Taxonomy, and Biogeography of Codinaea and Similar Fungi
The genus Codinaea is a phialidic, dematiaceous hyphomycete known for its intriguing morphology and turbulent taxonomic history. This polyphasic study represents a new, comprehensive view on the taxonomy, systematics, and biogeography of Codinaea and its relatives. Phylogenetic analyses of three nuc...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8704094/ https://www.ncbi.nlm.nih.gov/pubmed/34947079 http://dx.doi.org/10.3390/jof7121097 |
_version_ | 1784621624173002752 |
---|---|
author | Réblová, Martina Kolařík, Miroslav Nekvindová, Jana Réblová, Kamila Sklenář, František Miller, Andrew N. Hernández-Restrepo, Margarita |
author_facet | Réblová, Martina Kolařík, Miroslav Nekvindová, Jana Réblová, Kamila Sklenář, František Miller, Andrew N. Hernández-Restrepo, Margarita |
author_sort | Réblová, Martina |
collection | PubMed |
description | The genus Codinaea is a phialidic, dematiaceous hyphomycete known for its intriguing morphology and turbulent taxonomic history. This polyphasic study represents a new, comprehensive view on the taxonomy, systematics, and biogeography of Codinaea and its relatives. Phylogenetic analyses of three nuclear loci confirmed that Codinaea is polyphyletic. The generic concept was emended; it includes four morphotypes that contribute to its morphological complexity. Ancestral inference showed that the evolution of some traits is correlated and that these traits previously used to delimit taxa at the generic level occur in species that were shown to be congeneric. Five lineages of Codinaea-like fungi were recognized and introduced as new genera: Codinaeella, Nimesporella, Stilbochaeta, Tainosphaeriella, and Xyladelphia. Dual DNA barcoding facilitated identification at the species level. Codinaea and its segregates thrive on decaying plants, rarely occurring as endophytes or plant pathogens. Environmental ITS sequences indicate that they are common in bulk soil. The geographic distribution found using GlobalFungi database was consistent with known data. Most species are distributed in either the Holarctic realm or tropical geographic regions. The ancestral climatic zone was temperate, followed by transitions to the tropics; these fungi evolved primarily in Eurasia and Americas, with subsequent transitions to Africa and Australasia. |
format | Online Article Text |
id | pubmed-8704094 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-87040942021-12-25 Phylogenetic Reassessment, Taxonomy, and Biogeography of Codinaea and Similar Fungi Réblová, Martina Kolařík, Miroslav Nekvindová, Jana Réblová, Kamila Sklenář, František Miller, Andrew N. Hernández-Restrepo, Margarita J Fungi (Basel) Article The genus Codinaea is a phialidic, dematiaceous hyphomycete known for its intriguing morphology and turbulent taxonomic history. This polyphasic study represents a new, comprehensive view on the taxonomy, systematics, and biogeography of Codinaea and its relatives. Phylogenetic analyses of three nuclear loci confirmed that Codinaea is polyphyletic. The generic concept was emended; it includes four morphotypes that contribute to its morphological complexity. Ancestral inference showed that the evolution of some traits is correlated and that these traits previously used to delimit taxa at the generic level occur in species that were shown to be congeneric. Five lineages of Codinaea-like fungi were recognized and introduced as new genera: Codinaeella, Nimesporella, Stilbochaeta, Tainosphaeriella, and Xyladelphia. Dual DNA barcoding facilitated identification at the species level. Codinaea and its segregates thrive on decaying plants, rarely occurring as endophytes or plant pathogens. Environmental ITS sequences indicate that they are common in bulk soil. The geographic distribution found using GlobalFungi database was consistent with known data. Most species are distributed in either the Holarctic realm or tropical geographic regions. The ancestral climatic zone was temperate, followed by transitions to the tropics; these fungi evolved primarily in Eurasia and Americas, with subsequent transitions to Africa and Australasia. MDPI 2021-12-20 /pmc/articles/PMC8704094/ /pubmed/34947079 http://dx.doi.org/10.3390/jof7121097 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Réblová, Martina Kolařík, Miroslav Nekvindová, Jana Réblová, Kamila Sklenář, František Miller, Andrew N. Hernández-Restrepo, Margarita Phylogenetic Reassessment, Taxonomy, and Biogeography of Codinaea and Similar Fungi |
title | Phylogenetic Reassessment, Taxonomy, and Biogeography of Codinaea and Similar Fungi |
title_full | Phylogenetic Reassessment, Taxonomy, and Biogeography of Codinaea and Similar Fungi |
title_fullStr | Phylogenetic Reassessment, Taxonomy, and Biogeography of Codinaea and Similar Fungi |
title_full_unstemmed | Phylogenetic Reassessment, Taxonomy, and Biogeography of Codinaea and Similar Fungi |
title_short | Phylogenetic Reassessment, Taxonomy, and Biogeography of Codinaea and Similar Fungi |
title_sort | phylogenetic reassessment, taxonomy, and biogeography of codinaea and similar fungi |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8704094/ https://www.ncbi.nlm.nih.gov/pubmed/34947079 http://dx.doi.org/10.3390/jof7121097 |
work_keys_str_mv | AT reblovamartina phylogeneticreassessmenttaxonomyandbiogeographyofcodinaeaandsimilarfungi AT kolarikmiroslav phylogeneticreassessmenttaxonomyandbiogeographyofcodinaeaandsimilarfungi AT nekvindovajana phylogeneticreassessmenttaxonomyandbiogeographyofcodinaeaandsimilarfungi AT reblovakamila phylogeneticreassessmenttaxonomyandbiogeographyofcodinaeaandsimilarfungi AT sklenarfrantisek phylogeneticreassessmenttaxonomyandbiogeographyofcodinaeaandsimilarfungi AT millerandrewn phylogeneticreassessmenttaxonomyandbiogeographyofcodinaeaandsimilarfungi AT hernandezrestrepomargarita phylogeneticreassessmenttaxonomyandbiogeographyofcodinaeaandsimilarfungi |