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Temporal Patterns of Bacterial and Viral Communities during Algae Blooms of a Reservoir in Macau

Compositions of microbial communities associated with blooms of algae in a storage reservoir in Macau, China were investigated between 2013 and 2016. Algae were enumerated by visible light microscopy. Profiles of organisms in water were examined by 16S rRNA sequences and viral metagenomics, based on...

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Autores principales: Hu, Dini, Giesy, John P., Guo, Min, Ung, Wai Kin, Kong, Yijun, Mok, Kai Meng, Lee, Simon Ming-Yuen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8704429/
https://www.ncbi.nlm.nih.gov/pubmed/34941731
http://dx.doi.org/10.3390/toxins13120894
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author Hu, Dini
Giesy, John P.
Guo, Min
Ung, Wai Kin
Kong, Yijun
Mok, Kai Meng
Lee, Simon Ming-Yuen
author_facet Hu, Dini
Giesy, John P.
Guo, Min
Ung, Wai Kin
Kong, Yijun
Mok, Kai Meng
Lee, Simon Ming-Yuen
author_sort Hu, Dini
collection PubMed
description Compositions of microbial communities associated with blooms of algae in a storage reservoir in Macau, China were investigated between 2013 and 2016. Algae were enumerated by visible light microscopy. Profiles of organisms in water were examined by 16S rRNA sequences and viral metagenomics, based on next generation sequencing. Results of 16S rRNA sequencing indicated that majority of the identified organisms were bacteria closely related to Proteobacteria, Cyanobacteria, Verrucomicrobia, Bacteroidetes, and Actinobacteria. Metagenomics sequences demonstrated that the dominant virus was Phycodnavirus, accounting for 70% of the total population. Patterns of relative numbers of bacteria in the microbial community and their temporal changes were determined through alpha diversity indices, principal coordinates analysis (PCoA), relative abundance, and visualized by Venn diagrams. Ways in which the bacterial and viral communities are influenced by various water-related variables were elucidated based on redundancy analysis (RDA). Relationships of the relative numbers of bacteria with trophic status in a reservoir used for drinking water in Macau, provided insight into associations of Phycodnavirus and Proteobacteria with changes in blooms of algae.
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spelling pubmed-87044292021-12-25 Temporal Patterns of Bacterial and Viral Communities during Algae Blooms of a Reservoir in Macau Hu, Dini Giesy, John P. Guo, Min Ung, Wai Kin Kong, Yijun Mok, Kai Meng Lee, Simon Ming-Yuen Toxins (Basel) Article Compositions of microbial communities associated with blooms of algae in a storage reservoir in Macau, China were investigated between 2013 and 2016. Algae were enumerated by visible light microscopy. Profiles of organisms in water were examined by 16S rRNA sequences and viral metagenomics, based on next generation sequencing. Results of 16S rRNA sequencing indicated that majority of the identified organisms were bacteria closely related to Proteobacteria, Cyanobacteria, Verrucomicrobia, Bacteroidetes, and Actinobacteria. Metagenomics sequences demonstrated that the dominant virus was Phycodnavirus, accounting for 70% of the total population. Patterns of relative numbers of bacteria in the microbial community and their temporal changes were determined through alpha diversity indices, principal coordinates analysis (PCoA), relative abundance, and visualized by Venn diagrams. Ways in which the bacterial and viral communities are influenced by various water-related variables were elucidated based on redundancy analysis (RDA). Relationships of the relative numbers of bacteria with trophic status in a reservoir used for drinking water in Macau, provided insight into associations of Phycodnavirus and Proteobacteria with changes in blooms of algae. MDPI 2021-12-13 /pmc/articles/PMC8704429/ /pubmed/34941731 http://dx.doi.org/10.3390/toxins13120894 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Hu, Dini
Giesy, John P.
Guo, Min
Ung, Wai Kin
Kong, Yijun
Mok, Kai Meng
Lee, Simon Ming-Yuen
Temporal Patterns of Bacterial and Viral Communities during Algae Blooms of a Reservoir in Macau
title Temporal Patterns of Bacterial and Viral Communities during Algae Blooms of a Reservoir in Macau
title_full Temporal Patterns of Bacterial and Viral Communities during Algae Blooms of a Reservoir in Macau
title_fullStr Temporal Patterns of Bacterial and Viral Communities during Algae Blooms of a Reservoir in Macau
title_full_unstemmed Temporal Patterns of Bacterial and Viral Communities during Algae Blooms of a Reservoir in Macau
title_short Temporal Patterns of Bacterial and Viral Communities during Algae Blooms of a Reservoir in Macau
title_sort temporal patterns of bacterial and viral communities during algae blooms of a reservoir in macau
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8704429/
https://www.ncbi.nlm.nih.gov/pubmed/34941731
http://dx.doi.org/10.3390/toxins13120894
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