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Machine Learning and Radiomic Features to Predict Overall Survival Time for Glioblastoma Patients
Glioblastoma is an aggressive brain tumor with a low survival rate. Understanding tumor behavior by predicting prognosis outcomes is a crucial factor in deciding a proper treatment plan. In this paper, an automatic overall survival time prediction system (OST) for glioblastoma patients is developed...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8705288/ https://www.ncbi.nlm.nih.gov/pubmed/34945808 http://dx.doi.org/10.3390/jpm11121336 |
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author | Chato, Lina Latifi, Shahram |
author_facet | Chato, Lina Latifi, Shahram |
author_sort | Chato, Lina |
collection | PubMed |
description | Glioblastoma is an aggressive brain tumor with a low survival rate. Understanding tumor behavior by predicting prognosis outcomes is a crucial factor in deciding a proper treatment plan. In this paper, an automatic overall survival time prediction system (OST) for glioblastoma patients is developed on the basis of radiomic features and machine learning (ML). This system is designed to predict prognosis outcomes by classifying a glioblastoma patient into one of three survival groups: short-term, mid-term, and long-term. To develop the prediction system, a medical dataset based on imaging information from magnetic resonance imaging (MRI) and non-imaging information is used. A novel radiomic feature extraction method is proposed and developed on the basis of volumetric and location information of brain tumor subregions extracted from MRI scans. This method is based on calculating the volumetric features from two brain sub-volumes obtained from the whole brain volume in MRI images using brain sectional planes (sagittal, coronal, and horizontal). Many experiments are conducted on the basis of various ML methods and combinations of feature extraction methods to develop the best OST system. In addition, the feature fusions of both radiomic and non-imaging features are examined to improve the accuracy of the prediction system. The best performance was achieved by the neural network and feature fusions. |
format | Online Article Text |
id | pubmed-8705288 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-87052882021-12-25 Machine Learning and Radiomic Features to Predict Overall Survival Time for Glioblastoma Patients Chato, Lina Latifi, Shahram J Pers Med Article Glioblastoma is an aggressive brain tumor with a low survival rate. Understanding tumor behavior by predicting prognosis outcomes is a crucial factor in deciding a proper treatment plan. In this paper, an automatic overall survival time prediction system (OST) for glioblastoma patients is developed on the basis of radiomic features and machine learning (ML). This system is designed to predict prognosis outcomes by classifying a glioblastoma patient into one of three survival groups: short-term, mid-term, and long-term. To develop the prediction system, a medical dataset based on imaging information from magnetic resonance imaging (MRI) and non-imaging information is used. A novel radiomic feature extraction method is proposed and developed on the basis of volumetric and location information of brain tumor subregions extracted from MRI scans. This method is based on calculating the volumetric features from two brain sub-volumes obtained from the whole brain volume in MRI images using brain sectional planes (sagittal, coronal, and horizontal). Many experiments are conducted on the basis of various ML methods and combinations of feature extraction methods to develop the best OST system. In addition, the feature fusions of both radiomic and non-imaging features are examined to improve the accuracy of the prediction system. The best performance was achieved by the neural network and feature fusions. MDPI 2021-12-09 /pmc/articles/PMC8705288/ /pubmed/34945808 http://dx.doi.org/10.3390/jpm11121336 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Chato, Lina Latifi, Shahram Machine Learning and Radiomic Features to Predict Overall Survival Time for Glioblastoma Patients |
title | Machine Learning and Radiomic Features to Predict Overall Survival Time for Glioblastoma Patients |
title_full | Machine Learning and Radiomic Features to Predict Overall Survival Time for Glioblastoma Patients |
title_fullStr | Machine Learning and Radiomic Features to Predict Overall Survival Time for Glioblastoma Patients |
title_full_unstemmed | Machine Learning and Radiomic Features to Predict Overall Survival Time for Glioblastoma Patients |
title_short | Machine Learning and Radiomic Features to Predict Overall Survival Time for Glioblastoma Patients |
title_sort | machine learning and radiomic features to predict overall survival time for glioblastoma patients |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8705288/ https://www.ncbi.nlm.nih.gov/pubmed/34945808 http://dx.doi.org/10.3390/jpm11121336 |
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