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Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae
Tandem repeats of telomeric-like motifs at intra-chromosomal regions, known as interstitial telomeric repeats (ITR), have drawn attention as potential markers of structural changes, which might convey information about evolutionary relationships if preserved through time. Building on our previous wo...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8705333/ https://www.ncbi.nlm.nih.gov/pubmed/34961265 http://dx.doi.org/10.3390/plants10122794 |
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author | Maravilla, Alexis J. Rosato, Marcela Álvarez, Inés Nieto Feliner, Gonzalo Rosselló, Josep A. |
author_facet | Maravilla, Alexis J. Rosato, Marcela Álvarez, Inés Nieto Feliner, Gonzalo Rosselló, Josep A. |
author_sort | Maravilla, Alexis J. |
collection | PubMed |
description | Tandem repeats of telomeric-like motifs at intra-chromosomal regions, known as interstitial telomeric repeats (ITR), have drawn attention as potential markers of structural changes, which might convey information about evolutionary relationships if preserved through time. Building on our previous work that reported outstanding ITR polymorphisms in the genus Anacyclus, we undertook a survey across 132 Asteraceae species, focusing on the six most speciose subfamilies and considering all the ITR data published to date. The goal was to assess whether the presence, site number, and chromosomal location of ITRs convey any phylogenetic signal. We conducted fluorescent in situ hybridization (FISH) using an Arabidopsis-type telomeric sequence as a probe on karyotypes obtained from mitotic chromosomes. FISH signals of ITR sites were detected in species of subfamilies Asteroideae, Carduoideae, Cichorioideae, Gymnarhenoideae, and Mutisioideae, but not in Barnadesioideae. Although six small subfamilies have not yet been sampled, altogether, our results suggest that the dynamics of ITR formation in Asteraceae cannot accurately trace the complex karyological evolution that occurred since the early diversification of this family. Thus, ITRs do not convey a reliable signal at deep or shallow phylogenetic levels and cannot help to delimitate taxonomic categories, a conclusion that might also hold for other important families such as Fabaceae. |
format | Online Article Text |
id | pubmed-8705333 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-87053332021-12-25 Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae Maravilla, Alexis J. Rosato, Marcela Álvarez, Inés Nieto Feliner, Gonzalo Rosselló, Josep A. Plants (Basel) Article Tandem repeats of telomeric-like motifs at intra-chromosomal regions, known as interstitial telomeric repeats (ITR), have drawn attention as potential markers of structural changes, which might convey information about evolutionary relationships if preserved through time. Building on our previous work that reported outstanding ITR polymorphisms in the genus Anacyclus, we undertook a survey across 132 Asteraceae species, focusing on the six most speciose subfamilies and considering all the ITR data published to date. The goal was to assess whether the presence, site number, and chromosomal location of ITRs convey any phylogenetic signal. We conducted fluorescent in situ hybridization (FISH) using an Arabidopsis-type telomeric sequence as a probe on karyotypes obtained from mitotic chromosomes. FISH signals of ITR sites were detected in species of subfamilies Asteroideae, Carduoideae, Cichorioideae, Gymnarhenoideae, and Mutisioideae, but not in Barnadesioideae. Although six small subfamilies have not yet been sampled, altogether, our results suggest that the dynamics of ITR formation in Asteraceae cannot accurately trace the complex karyological evolution that occurred since the early diversification of this family. Thus, ITRs do not convey a reliable signal at deep or shallow phylogenetic levels and cannot help to delimitate taxonomic categories, a conclusion that might also hold for other important families such as Fabaceae. MDPI 2021-12-17 /pmc/articles/PMC8705333/ /pubmed/34961265 http://dx.doi.org/10.3390/plants10122794 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Maravilla, Alexis J. Rosato, Marcela Álvarez, Inés Nieto Feliner, Gonzalo Rosselló, Josep A. Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae |
title | Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae |
title_full | Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae |
title_fullStr | Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae |
title_full_unstemmed | Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae |
title_short | Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae |
title_sort | interstitial arabidopsis-type telomeric repeats in asteraceae |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8705333/ https://www.ncbi.nlm.nih.gov/pubmed/34961265 http://dx.doi.org/10.3390/plants10122794 |
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