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Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae

Tandem repeats of telomeric-like motifs at intra-chromosomal regions, known as interstitial telomeric repeats (ITR), have drawn attention as potential markers of structural changes, which might convey information about evolutionary relationships if preserved through time. Building on our previous wo...

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Autores principales: Maravilla, Alexis J., Rosato, Marcela, Álvarez, Inés, Nieto Feliner, Gonzalo, Rosselló, Josep A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8705333/
https://www.ncbi.nlm.nih.gov/pubmed/34961265
http://dx.doi.org/10.3390/plants10122794
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author Maravilla, Alexis J.
Rosato, Marcela
Álvarez, Inés
Nieto Feliner, Gonzalo
Rosselló, Josep A.
author_facet Maravilla, Alexis J.
Rosato, Marcela
Álvarez, Inés
Nieto Feliner, Gonzalo
Rosselló, Josep A.
author_sort Maravilla, Alexis J.
collection PubMed
description Tandem repeats of telomeric-like motifs at intra-chromosomal regions, known as interstitial telomeric repeats (ITR), have drawn attention as potential markers of structural changes, which might convey information about evolutionary relationships if preserved through time. Building on our previous work that reported outstanding ITR polymorphisms in the genus Anacyclus, we undertook a survey across 132 Asteraceae species, focusing on the six most speciose subfamilies and considering all the ITR data published to date. The goal was to assess whether the presence, site number, and chromosomal location of ITRs convey any phylogenetic signal. We conducted fluorescent in situ hybridization (FISH) using an Arabidopsis-type telomeric sequence as a probe on karyotypes obtained from mitotic chromosomes. FISH signals of ITR sites were detected in species of subfamilies Asteroideae, Carduoideae, Cichorioideae, Gymnarhenoideae, and Mutisioideae, but not in Barnadesioideae. Although six small subfamilies have not yet been sampled, altogether, our results suggest that the dynamics of ITR formation in Asteraceae cannot accurately trace the complex karyological evolution that occurred since the early diversification of this family. Thus, ITRs do not convey a reliable signal at deep or shallow phylogenetic levels and cannot help to delimitate taxonomic categories, a conclusion that might also hold for other important families such as Fabaceae.
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spelling pubmed-87053332021-12-25 Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae Maravilla, Alexis J. Rosato, Marcela Álvarez, Inés Nieto Feliner, Gonzalo Rosselló, Josep A. Plants (Basel) Article Tandem repeats of telomeric-like motifs at intra-chromosomal regions, known as interstitial telomeric repeats (ITR), have drawn attention as potential markers of structural changes, which might convey information about evolutionary relationships if preserved through time. Building on our previous work that reported outstanding ITR polymorphisms in the genus Anacyclus, we undertook a survey across 132 Asteraceae species, focusing on the six most speciose subfamilies and considering all the ITR data published to date. The goal was to assess whether the presence, site number, and chromosomal location of ITRs convey any phylogenetic signal. We conducted fluorescent in situ hybridization (FISH) using an Arabidopsis-type telomeric sequence as a probe on karyotypes obtained from mitotic chromosomes. FISH signals of ITR sites were detected in species of subfamilies Asteroideae, Carduoideae, Cichorioideae, Gymnarhenoideae, and Mutisioideae, but not in Barnadesioideae. Although six small subfamilies have not yet been sampled, altogether, our results suggest that the dynamics of ITR formation in Asteraceae cannot accurately trace the complex karyological evolution that occurred since the early diversification of this family. Thus, ITRs do not convey a reliable signal at deep or shallow phylogenetic levels and cannot help to delimitate taxonomic categories, a conclusion that might also hold for other important families such as Fabaceae. MDPI 2021-12-17 /pmc/articles/PMC8705333/ /pubmed/34961265 http://dx.doi.org/10.3390/plants10122794 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Maravilla, Alexis J.
Rosato, Marcela
Álvarez, Inés
Nieto Feliner, Gonzalo
Rosselló, Josep A.
Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae
title Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae
title_full Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae
title_fullStr Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae
title_full_unstemmed Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae
title_short Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae
title_sort interstitial arabidopsis-type telomeric repeats in asteraceae
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8705333/
https://www.ncbi.nlm.nih.gov/pubmed/34961265
http://dx.doi.org/10.3390/plants10122794
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