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Predictive Machine Learning Models and Survival Analysis for COVID-19 Prognosis Based on Hematochemical Parameters

The coronavirus disease 2019 (COVID-19) pandemic has affected hundreds of millions of individuals and caused millions of deaths worldwide. Predicting the clinical course of the disease is of pivotal importance to manage patients. Several studies have found hematochemical alterations in COVID-19 pati...

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Autores principales: Altini, Nicola, Brunetti, Antonio, Mazzoleni, Stefano, Moncelli, Fabrizio, Zagaria, Ilenia, Prencipe, Berardino, Lorusso, Erika, Buonamico, Enrico, Carpagnano, Giovanna Elisiana, Bavaro, Davide Fiore, Poliseno, Mariacristina, Saracino, Annalisa, Schirinzi, Annalisa, Laterza, Riccardo, Di Serio, Francesca, D’Introno, Alessia, Pesce, Francesco, Bevilacqua, Vitoantonio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8705488/
https://www.ncbi.nlm.nih.gov/pubmed/34960595
http://dx.doi.org/10.3390/s21248503
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author Altini, Nicola
Brunetti, Antonio
Mazzoleni, Stefano
Moncelli, Fabrizio
Zagaria, Ilenia
Prencipe, Berardino
Lorusso, Erika
Buonamico, Enrico
Carpagnano, Giovanna Elisiana
Bavaro, Davide Fiore
Poliseno, Mariacristina
Saracino, Annalisa
Schirinzi, Annalisa
Laterza, Riccardo
Di Serio, Francesca
D’Introno, Alessia
Pesce, Francesco
Bevilacqua, Vitoantonio
author_facet Altini, Nicola
Brunetti, Antonio
Mazzoleni, Stefano
Moncelli, Fabrizio
Zagaria, Ilenia
Prencipe, Berardino
Lorusso, Erika
Buonamico, Enrico
Carpagnano, Giovanna Elisiana
Bavaro, Davide Fiore
Poliseno, Mariacristina
Saracino, Annalisa
Schirinzi, Annalisa
Laterza, Riccardo
Di Serio, Francesca
D’Introno, Alessia
Pesce, Francesco
Bevilacqua, Vitoantonio
author_sort Altini, Nicola
collection PubMed
description The coronavirus disease 2019 (COVID-19) pandemic has affected hundreds of millions of individuals and caused millions of deaths worldwide. Predicting the clinical course of the disease is of pivotal importance to manage patients. Several studies have found hematochemical alterations in COVID-19 patients, such as inflammatory markers. We retrospectively analyzed the anamnestic data and laboratory parameters of 303 patients diagnosed with COVID-19 who were admitted to the Polyclinic Hospital of Bari during the first phase of the COVID-19 global pandemic. After the pre-processing phase, we performed a survival analysis with Kaplan–Meier curves and Cox Regression, with the aim to discover the most unfavorable predictors. The target outcomes were mortality or admission to the intensive care unit (ICU). Different machine learning models were also compared to realize a robust classifier relying on a low number of strongly significant factors to estimate the risk of death or admission to ICU. From the survival analysis, it emerged that the most significant laboratory parameters for both outcomes was C-reactive protein min; [Formula: see text] (95% CI 6.548–49.277, p < 0.001) for death, [Formula: see text] (95% CI 1.000–3.200, p = 0.050) for admission to ICU. The second most important parameter was Erythrocytes max; [Formula: see text] (95% CI 1.141–2.729, p < 0.05) for death, [Formula: see text] (95% CI 0.895–2.452, p = 0.127) for admission to ICU. The best model for predicting the risk of death was the decision tree, which resulted in ROC-AUC of 89.66%, whereas the best model for predicting the admission to ICU was support vector machine, which had ROC-AUC of 95.07%. The hematochemical predictors identified in this study can be utilized as a strong prognostic signature to characterize the severity of the disease in COVID-19 patients.
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spelling pubmed-87054882021-12-25 Predictive Machine Learning Models and Survival Analysis for COVID-19 Prognosis Based on Hematochemical Parameters Altini, Nicola Brunetti, Antonio Mazzoleni, Stefano Moncelli, Fabrizio Zagaria, Ilenia Prencipe, Berardino Lorusso, Erika Buonamico, Enrico Carpagnano, Giovanna Elisiana Bavaro, Davide Fiore Poliseno, Mariacristina Saracino, Annalisa Schirinzi, Annalisa Laterza, Riccardo Di Serio, Francesca D’Introno, Alessia Pesce, Francesco Bevilacqua, Vitoantonio Sensors (Basel) Article The coronavirus disease 2019 (COVID-19) pandemic has affected hundreds of millions of individuals and caused millions of deaths worldwide. Predicting the clinical course of the disease is of pivotal importance to manage patients. Several studies have found hematochemical alterations in COVID-19 patients, such as inflammatory markers. We retrospectively analyzed the anamnestic data and laboratory parameters of 303 patients diagnosed with COVID-19 who were admitted to the Polyclinic Hospital of Bari during the first phase of the COVID-19 global pandemic. After the pre-processing phase, we performed a survival analysis with Kaplan–Meier curves and Cox Regression, with the aim to discover the most unfavorable predictors. The target outcomes were mortality or admission to the intensive care unit (ICU). Different machine learning models were also compared to realize a robust classifier relying on a low number of strongly significant factors to estimate the risk of death or admission to ICU. From the survival analysis, it emerged that the most significant laboratory parameters for both outcomes was C-reactive protein min; [Formula: see text] (95% CI 6.548–49.277, p < 0.001) for death, [Formula: see text] (95% CI 1.000–3.200, p = 0.050) for admission to ICU. The second most important parameter was Erythrocytes max; [Formula: see text] (95% CI 1.141–2.729, p < 0.05) for death, [Formula: see text] (95% CI 0.895–2.452, p = 0.127) for admission to ICU. The best model for predicting the risk of death was the decision tree, which resulted in ROC-AUC of 89.66%, whereas the best model for predicting the admission to ICU was support vector machine, which had ROC-AUC of 95.07%. The hematochemical predictors identified in this study can be utilized as a strong prognostic signature to characterize the severity of the disease in COVID-19 patients. MDPI 2021-12-20 /pmc/articles/PMC8705488/ /pubmed/34960595 http://dx.doi.org/10.3390/s21248503 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Altini, Nicola
Brunetti, Antonio
Mazzoleni, Stefano
Moncelli, Fabrizio
Zagaria, Ilenia
Prencipe, Berardino
Lorusso, Erika
Buonamico, Enrico
Carpagnano, Giovanna Elisiana
Bavaro, Davide Fiore
Poliseno, Mariacristina
Saracino, Annalisa
Schirinzi, Annalisa
Laterza, Riccardo
Di Serio, Francesca
D’Introno, Alessia
Pesce, Francesco
Bevilacqua, Vitoantonio
Predictive Machine Learning Models and Survival Analysis for COVID-19 Prognosis Based on Hematochemical Parameters
title Predictive Machine Learning Models and Survival Analysis for COVID-19 Prognosis Based on Hematochemical Parameters
title_full Predictive Machine Learning Models and Survival Analysis for COVID-19 Prognosis Based on Hematochemical Parameters
title_fullStr Predictive Machine Learning Models and Survival Analysis for COVID-19 Prognosis Based on Hematochemical Parameters
title_full_unstemmed Predictive Machine Learning Models and Survival Analysis for COVID-19 Prognosis Based on Hematochemical Parameters
title_short Predictive Machine Learning Models and Survival Analysis for COVID-19 Prognosis Based on Hematochemical Parameters
title_sort predictive machine learning models and survival analysis for covid-19 prognosis based on hematochemical parameters
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8705488/
https://www.ncbi.nlm.nih.gov/pubmed/34960595
http://dx.doi.org/10.3390/s21248503
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