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Manual Annotation of Time in Bed Using Free-Living Recordings of Accelerometry Data

With the emergence of machine learning for the classification of sleep and other human behaviors from accelerometer data, the need for correctly annotated data is higher than ever. We present and evaluate a novel method for the manual annotation of in-bed periods in accelerometer data using the open...

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Autores principales: Skovgaard, Esben Lykke, Pedersen, Jesper, Møller, Niels Christian, Grøntved, Anders, Brønd, Jan Christian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8707394/
https://www.ncbi.nlm.nih.gov/pubmed/34960533
http://dx.doi.org/10.3390/s21248442
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author Skovgaard, Esben Lykke
Pedersen, Jesper
Møller, Niels Christian
Grøntved, Anders
Brønd, Jan Christian
author_facet Skovgaard, Esben Lykke
Pedersen, Jesper
Møller, Niels Christian
Grøntved, Anders
Brønd, Jan Christian
author_sort Skovgaard, Esben Lykke
collection PubMed
description With the emergence of machine learning for the classification of sleep and other human behaviors from accelerometer data, the need for correctly annotated data is higher than ever. We present and evaluate a novel method for the manual annotation of in-bed periods in accelerometer data using the open-source software Audacity(®), and we compare the method to the EEG-based sleep monitoring device Zmachine(®) Insight+ and self-reported sleep diaries. For evaluating the manual annotation method, we calculated the inter- and intra-rater agreement and agreement with Zmachine and sleep diaries using interclass correlation coefficients and Bland–Altman analysis. Our results showed excellent inter- and intra-rater agreement and excellent agreement with Zmachine and sleep diaries. The Bland–Altman limits of agreement were generally around ±30 min for the comparison between the manual annotation and the Zmachine timestamps for the in-bed period. Moreover, the mean bias was minuscule. We conclude that the manual annotation method presented is a viable option for annotating in-bed periods in accelerometer data, which will further qualify datasets without labeling or sleep records.
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spelling pubmed-87073942021-12-25 Manual Annotation of Time in Bed Using Free-Living Recordings of Accelerometry Data Skovgaard, Esben Lykke Pedersen, Jesper Møller, Niels Christian Grøntved, Anders Brønd, Jan Christian Sensors (Basel) Article With the emergence of machine learning for the classification of sleep and other human behaviors from accelerometer data, the need for correctly annotated data is higher than ever. We present and evaluate a novel method for the manual annotation of in-bed periods in accelerometer data using the open-source software Audacity(®), and we compare the method to the EEG-based sleep monitoring device Zmachine(®) Insight+ and self-reported sleep diaries. For evaluating the manual annotation method, we calculated the inter- and intra-rater agreement and agreement with Zmachine and sleep diaries using interclass correlation coefficients and Bland–Altman analysis. Our results showed excellent inter- and intra-rater agreement and excellent agreement with Zmachine and sleep diaries. The Bland–Altman limits of agreement were generally around ±30 min for the comparison between the manual annotation and the Zmachine timestamps for the in-bed period. Moreover, the mean bias was minuscule. We conclude that the manual annotation method presented is a viable option for annotating in-bed periods in accelerometer data, which will further qualify datasets without labeling or sleep records. MDPI 2021-12-17 /pmc/articles/PMC8707394/ /pubmed/34960533 http://dx.doi.org/10.3390/s21248442 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Skovgaard, Esben Lykke
Pedersen, Jesper
Møller, Niels Christian
Grøntved, Anders
Brønd, Jan Christian
Manual Annotation of Time in Bed Using Free-Living Recordings of Accelerometry Data
title Manual Annotation of Time in Bed Using Free-Living Recordings of Accelerometry Data
title_full Manual Annotation of Time in Bed Using Free-Living Recordings of Accelerometry Data
title_fullStr Manual Annotation of Time in Bed Using Free-Living Recordings of Accelerometry Data
title_full_unstemmed Manual Annotation of Time in Bed Using Free-Living Recordings of Accelerometry Data
title_short Manual Annotation of Time in Bed Using Free-Living Recordings of Accelerometry Data
title_sort manual annotation of time in bed using free-living recordings of accelerometry data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8707394/
https://www.ncbi.nlm.nih.gov/pubmed/34960533
http://dx.doi.org/10.3390/s21248442
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