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A Five Collagen-Related Gene Signature to Estimate the Prognosis and Immune Microenvironment in Clear Cell Renal Cell Cancer

Collagen is the main component of the extracellular matrix (ECM) and might play an important role in tumor microenvironments. However, the relationship between collagen and clear cell renal cell cancer (ccRCC) is still not fully clarified. Hence, we aimed to establish a collagen-related signature to...

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Autores principales: Shi, Xiaokai, Zhou, Xiao, Yue, Chuang, Gao, Shenglin, Sun, Zhiqin, Lu, Chao, Zuo, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8707639/
https://www.ncbi.nlm.nih.gov/pubmed/34960256
http://dx.doi.org/10.3390/vaccines9121510
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author Shi, Xiaokai
Zhou, Xiao
Yue, Chuang
Gao, Shenglin
Sun, Zhiqin
Lu, Chao
Zuo, Li
author_facet Shi, Xiaokai
Zhou, Xiao
Yue, Chuang
Gao, Shenglin
Sun, Zhiqin
Lu, Chao
Zuo, Li
author_sort Shi, Xiaokai
collection PubMed
description Collagen is the main component of the extracellular matrix (ECM) and might play an important role in tumor microenvironments. However, the relationship between collagen and clear cell renal cell cancer (ccRCC) is still not fully clarified. Hence, we aimed to establish a collagen-related signature to predict the prognosis and estimate the tumor immune microenvironment in ccRCC patients. Patients with a high risk score were often correlated with unfavorable overall survival (OS) and an immunosuppressive microenvironment. In addition, the collagen-related genetic signature was highly correlated with clinical pathological features and can be considered as an independent prognostic factor in ccRCC patients. Moreover, GSEA results show that patients with a high risk grade tend to be associated with epithelial–mesenchymal junctions (EMT) and immune responses. In this study, we developed a collagen-related gene signature, which might possess the potential to predict the prognosis and immune microenvironment of ccRCC patients and function as an independent prognostic factor in ccRCC.
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spelling pubmed-87076392021-12-25 A Five Collagen-Related Gene Signature to Estimate the Prognosis and Immune Microenvironment in Clear Cell Renal Cell Cancer Shi, Xiaokai Zhou, Xiao Yue, Chuang Gao, Shenglin Sun, Zhiqin Lu, Chao Zuo, Li Vaccines (Basel) Article Collagen is the main component of the extracellular matrix (ECM) and might play an important role in tumor microenvironments. However, the relationship between collagen and clear cell renal cell cancer (ccRCC) is still not fully clarified. Hence, we aimed to establish a collagen-related signature to predict the prognosis and estimate the tumor immune microenvironment in ccRCC patients. Patients with a high risk score were often correlated with unfavorable overall survival (OS) and an immunosuppressive microenvironment. In addition, the collagen-related genetic signature was highly correlated with clinical pathological features and can be considered as an independent prognostic factor in ccRCC patients. Moreover, GSEA results show that patients with a high risk grade tend to be associated with epithelial–mesenchymal junctions (EMT) and immune responses. In this study, we developed a collagen-related gene signature, which might possess the potential to predict the prognosis and immune microenvironment of ccRCC patients and function as an independent prognostic factor in ccRCC. MDPI 2021-12-20 /pmc/articles/PMC8707639/ /pubmed/34960256 http://dx.doi.org/10.3390/vaccines9121510 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Shi, Xiaokai
Zhou, Xiao
Yue, Chuang
Gao, Shenglin
Sun, Zhiqin
Lu, Chao
Zuo, Li
A Five Collagen-Related Gene Signature to Estimate the Prognosis and Immune Microenvironment in Clear Cell Renal Cell Cancer
title A Five Collagen-Related Gene Signature to Estimate the Prognosis and Immune Microenvironment in Clear Cell Renal Cell Cancer
title_full A Five Collagen-Related Gene Signature to Estimate the Prognosis and Immune Microenvironment in Clear Cell Renal Cell Cancer
title_fullStr A Five Collagen-Related Gene Signature to Estimate the Prognosis and Immune Microenvironment in Clear Cell Renal Cell Cancer
title_full_unstemmed A Five Collagen-Related Gene Signature to Estimate the Prognosis and Immune Microenvironment in Clear Cell Renal Cell Cancer
title_short A Five Collagen-Related Gene Signature to Estimate the Prognosis and Immune Microenvironment in Clear Cell Renal Cell Cancer
title_sort five collagen-related gene signature to estimate the prognosis and immune microenvironment in clear cell renal cell cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8707639/
https://www.ncbi.nlm.nih.gov/pubmed/34960256
http://dx.doi.org/10.3390/vaccines9121510
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