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COVID-19 Interpretable Diagnosis Algorithm Based on a Small Number of Chest X-Ray Samples

The COVID-19 medical diagnosis method based on individual’s chest X-ray (CXR) is achieved difficultly in the initial research, owing to difficulties in identifying CXR data of COVID-19 individuals. At the beginning of the study, infected individuals’ CXRs were scarce. The combination of artificial i...

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Detalles Bibliográficos
Autores principales: Bu, Ran, Xiang, Wei, Cao, Shitong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Shanghai Jiaotong University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8710817/
https://www.ncbi.nlm.nih.gov/pubmed/34975264
http://dx.doi.org/10.1007/s12204-021-2393-2
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author Bu, Ran
Xiang, Wei
Cao, Shitong
author_facet Bu, Ran
Xiang, Wei
Cao, Shitong
author_sort Bu, Ran
collection PubMed
description The COVID-19 medical diagnosis method based on individual’s chest X-ray (CXR) is achieved difficultly in the initial research, owing to difficulties in identifying CXR data of COVID-19 individuals. At the beginning of the study, infected individuals’ CXRs were scarce. The combination of artificial intelligence and medical diagnosis has been advanced and popular. To solve the difficulties, the interpretability analysis of AI model was used to explore the pathological characteristics of CXR samples infected with COVID-19 and assist medical diagnosis. The dataset was expanded by data augmentation to avoid overfitting. Transfer learning was used to test different pre-trained models and the unique output layers were designed to complete the model training with few samples. In this study, the output results of four pre-trained models were compared in three different output layers, and the results after data augmentation were compared with the results of the original dataset. The control variable method was used to conduct independent tests of 24 groups. Finally, 99.23% accuracy and 98% recall rate were obtained, and the visual results of CXR interpretability analysis were displayed. The network of COVID-19 interpretable diagnosis algorithm has the characteristics of high generalization and lightweight. It can be quickly applied to other urgent tasks with insufficient experimental data. At the same time, interpretability analysis brings new possibilities for medical diagnosis.
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spelling pubmed-87108172021-12-27 COVID-19 Interpretable Diagnosis Algorithm Based on a Small Number of Chest X-Ray Samples Bu, Ran Xiang, Wei Cao, Shitong J Shanghai Jiaotong Univ Sci Article The COVID-19 medical diagnosis method based on individual’s chest X-ray (CXR) is achieved difficultly in the initial research, owing to difficulties in identifying CXR data of COVID-19 individuals. At the beginning of the study, infected individuals’ CXRs were scarce. The combination of artificial intelligence and medical diagnosis has been advanced and popular. To solve the difficulties, the interpretability analysis of AI model was used to explore the pathological characteristics of CXR samples infected with COVID-19 and assist medical diagnosis. The dataset was expanded by data augmentation to avoid overfitting. Transfer learning was used to test different pre-trained models and the unique output layers were designed to complete the model training with few samples. In this study, the output results of four pre-trained models were compared in three different output layers, and the results after data augmentation were compared with the results of the original dataset. The control variable method was used to conduct independent tests of 24 groups. Finally, 99.23% accuracy and 98% recall rate were obtained, and the visual results of CXR interpretability analysis were displayed. The network of COVID-19 interpretable diagnosis algorithm has the characteristics of high generalization and lightweight. It can be quickly applied to other urgent tasks with insufficient experimental data. At the same time, interpretability analysis brings new possibilities for medical diagnosis. Shanghai Jiaotong University Press 2021-12-26 2022 /pmc/articles/PMC8710817/ /pubmed/34975264 http://dx.doi.org/10.1007/s12204-021-2393-2 Text en © Shanghai Jiao Tong University and Springer-Verlag GmbH Germany, part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Bu, Ran
Xiang, Wei
Cao, Shitong
COVID-19 Interpretable Diagnosis Algorithm Based on a Small Number of Chest X-Ray Samples
title COVID-19 Interpretable Diagnosis Algorithm Based on a Small Number of Chest X-Ray Samples
title_full COVID-19 Interpretable Diagnosis Algorithm Based on a Small Number of Chest X-Ray Samples
title_fullStr COVID-19 Interpretable Diagnosis Algorithm Based on a Small Number of Chest X-Ray Samples
title_full_unstemmed COVID-19 Interpretable Diagnosis Algorithm Based on a Small Number of Chest X-Ray Samples
title_short COVID-19 Interpretable Diagnosis Algorithm Based on a Small Number of Chest X-Ray Samples
title_sort covid-19 interpretable diagnosis algorithm based on a small number of chest x-ray samples
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8710817/
https://www.ncbi.nlm.nih.gov/pubmed/34975264
http://dx.doi.org/10.1007/s12204-021-2393-2
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