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Potential quality pitfalls of digitalized whole slide image of breast pathology in routine practice

Using digitalized whole slide images (WSI) in routine histopathology practice is a revolutionary technology. This study aims to assess the clinical impacts of WSI quality and representation of the corresponding glass slides. 40,160 breast WSIs were examined and compared with their corresponding glas...

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Autores principales: Atallah, Nehal M., Toss, Michael S., Verrill, Clare, Salto-Tellez, Manuel, Snead, David, Rakha, Emad A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group US 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8711290/
https://www.ncbi.nlm.nih.gov/pubmed/34961765
http://dx.doi.org/10.1038/s41379-021-01000-8
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author Atallah, Nehal M.
Toss, Michael S.
Verrill, Clare
Salto-Tellez, Manuel
Snead, David
Rakha, Emad A.
author_facet Atallah, Nehal M.
Toss, Michael S.
Verrill, Clare
Salto-Tellez, Manuel
Snead, David
Rakha, Emad A.
author_sort Atallah, Nehal M.
collection PubMed
description Using digitalized whole slide images (WSI) in routine histopathology practice is a revolutionary technology. This study aims to assess the clinical impacts of WSI quality and representation of the corresponding glass slides. 40,160 breast WSIs were examined and compared with their corresponding glass slides. The presence, frequency, location, tissue type, and the clinical impacts of missing tissue were assessed. Scanning time, type of the specimens, time to WSIs implementation, and quality control (QC) measures were also considered. The frequency of missing tissue ranged from 2% to 19%. The area size of the missed tissue ranged from 1–70%. In most cases (>75%), the missing tissue area size was <10% and peripherally located. In all cases the missed tissue was fat with or without small entrapped normal breast parenchyma. No missing tissue was identified in WSIs of the core biopsy specimens. QC measures improved images quality and reduced WSI failure rates by seven-fold. A negative linear correlation between the frequency of missing tissue and both the scanning time and the image file size was observed (p < 0.05). None of the WSI with missing tissues resulted in a change in the final diagnosis. Missing tissue on breast WSI is observed but with variable frequency and little diagnostic consequence. Balancing between WSI quality and scanning time/image file size should be considered and pathology laboratories should undertake their own assessments of risk and provide the relevant mitigations with the appropriate level of caution.
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spelling pubmed-87112902021-12-28 Potential quality pitfalls of digitalized whole slide image of breast pathology in routine practice Atallah, Nehal M. Toss, Michael S. Verrill, Clare Salto-Tellez, Manuel Snead, David Rakha, Emad A. Mod Pathol Article Using digitalized whole slide images (WSI) in routine histopathology practice is a revolutionary technology. This study aims to assess the clinical impacts of WSI quality and representation of the corresponding glass slides. 40,160 breast WSIs were examined and compared with their corresponding glass slides. The presence, frequency, location, tissue type, and the clinical impacts of missing tissue were assessed. Scanning time, type of the specimens, time to WSIs implementation, and quality control (QC) measures were also considered. The frequency of missing tissue ranged from 2% to 19%. The area size of the missed tissue ranged from 1–70%. In most cases (>75%), the missing tissue area size was <10% and peripherally located. In all cases the missed tissue was fat with or without small entrapped normal breast parenchyma. No missing tissue was identified in WSIs of the core biopsy specimens. QC measures improved images quality and reduced WSI failure rates by seven-fold. A negative linear correlation between the frequency of missing tissue and both the scanning time and the image file size was observed (p < 0.05). None of the WSI with missing tissues resulted in a change in the final diagnosis. Missing tissue on breast WSI is observed but with variable frequency and little diagnostic consequence. Balancing between WSI quality and scanning time/image file size should be considered and pathology laboratories should undertake their own assessments of risk and provide the relevant mitigations with the appropriate level of caution. Nature Publishing Group US 2021-12-27 2022 /pmc/articles/PMC8711290/ /pubmed/34961765 http://dx.doi.org/10.1038/s41379-021-01000-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Atallah, Nehal M.
Toss, Michael S.
Verrill, Clare
Salto-Tellez, Manuel
Snead, David
Rakha, Emad A.
Potential quality pitfalls of digitalized whole slide image of breast pathology in routine practice
title Potential quality pitfalls of digitalized whole slide image of breast pathology in routine practice
title_full Potential quality pitfalls of digitalized whole slide image of breast pathology in routine practice
title_fullStr Potential quality pitfalls of digitalized whole slide image of breast pathology in routine practice
title_full_unstemmed Potential quality pitfalls of digitalized whole slide image of breast pathology in routine practice
title_short Potential quality pitfalls of digitalized whole slide image of breast pathology in routine practice
title_sort potential quality pitfalls of digitalized whole slide image of breast pathology in routine practice
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8711290/
https://www.ncbi.nlm.nih.gov/pubmed/34961765
http://dx.doi.org/10.1038/s41379-021-01000-8
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