Cargando…
Tracing contacts to evaluate the transmission of COVID-19 from highly exposed individuals in public transportation
We investigate, through a data-driven contact tracing model, the transmission of COVID-19 inside buses during distinct phases of the pandemic in a large Brazilian city. From this microscopic approach, we recover the networks of close contacts within consecutive time windows. A longitudinal compariso...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8712527/ https://www.ncbi.nlm.nih.gov/pubmed/34961776 http://dx.doi.org/10.1038/s41598-021-03998-y |
_version_ | 1784623573883682816 |
---|---|
author | Ponte, Caio Carmona, Humberto A. Oliveira, Erneson A. Caminha, Carlos Lima, Antonio S. Andrade, José S. Furtado, Vasco |
author_facet | Ponte, Caio Carmona, Humberto A. Oliveira, Erneson A. Caminha, Carlos Lima, Antonio S. Andrade, José S. Furtado, Vasco |
author_sort | Ponte, Caio |
collection | PubMed |
description | We investigate, through a data-driven contact tracing model, the transmission of COVID-19 inside buses during distinct phases of the pandemic in a large Brazilian city. From this microscopic approach, we recover the networks of close contacts within consecutive time windows. A longitudinal comparison is then performed by upscaling the traced contacts with the transmission computed from a mean-field compartmental model for the entire city. Our results show that the effective reproduction numbers inside the buses, [Formula: see text] , and in the city, [Formula: see text] , followed a compatible behavior during the first wave of the local outbreak. Moreover, by distinguishing the close contacts of healthcare workers in the buses, we discovered that their transmission, [Formula: see text] , during the same period, was systematically higher than [Formula: see text] . This result reinforces the need for special public transportation policies for highly exposed groups of people. |
format | Online Article Text |
id | pubmed-8712527 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-87125272021-12-28 Tracing contacts to evaluate the transmission of COVID-19 from highly exposed individuals in public transportation Ponte, Caio Carmona, Humberto A. Oliveira, Erneson A. Caminha, Carlos Lima, Antonio S. Andrade, José S. Furtado, Vasco Sci Rep Article We investigate, through a data-driven contact tracing model, the transmission of COVID-19 inside buses during distinct phases of the pandemic in a large Brazilian city. From this microscopic approach, we recover the networks of close contacts within consecutive time windows. A longitudinal comparison is then performed by upscaling the traced contacts with the transmission computed from a mean-field compartmental model for the entire city. Our results show that the effective reproduction numbers inside the buses, [Formula: see text] , and in the city, [Formula: see text] , followed a compatible behavior during the first wave of the local outbreak. Moreover, by distinguishing the close contacts of healthcare workers in the buses, we discovered that their transmission, [Formula: see text] , during the same period, was systematically higher than [Formula: see text] . This result reinforces the need for special public transportation policies for highly exposed groups of people. Nature Publishing Group UK 2021-12-27 /pmc/articles/PMC8712527/ /pubmed/34961776 http://dx.doi.org/10.1038/s41598-021-03998-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Ponte, Caio Carmona, Humberto A. Oliveira, Erneson A. Caminha, Carlos Lima, Antonio S. Andrade, José S. Furtado, Vasco Tracing contacts to evaluate the transmission of COVID-19 from highly exposed individuals in public transportation |
title | Tracing contacts to evaluate the transmission of COVID-19 from highly exposed individuals in public transportation |
title_full | Tracing contacts to evaluate the transmission of COVID-19 from highly exposed individuals in public transportation |
title_fullStr | Tracing contacts to evaluate the transmission of COVID-19 from highly exposed individuals in public transportation |
title_full_unstemmed | Tracing contacts to evaluate the transmission of COVID-19 from highly exposed individuals in public transportation |
title_short | Tracing contacts to evaluate the transmission of COVID-19 from highly exposed individuals in public transportation |
title_sort | tracing contacts to evaluate the transmission of covid-19 from highly exposed individuals in public transportation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8712527/ https://www.ncbi.nlm.nih.gov/pubmed/34961776 http://dx.doi.org/10.1038/s41598-021-03998-y |
work_keys_str_mv | AT pontecaio tracingcontactstoevaluatethetransmissionofcovid19fromhighlyexposedindividualsinpublictransportation AT carmonahumbertoa tracingcontactstoevaluatethetransmissionofcovid19fromhighlyexposedindividualsinpublictransportation AT oliveiraernesona tracingcontactstoevaluatethetransmissionofcovid19fromhighlyexposedindividualsinpublictransportation AT caminhacarlos tracingcontactstoevaluatethetransmissionofcovid19fromhighlyexposedindividualsinpublictransportation AT limaantonios tracingcontactstoevaluatethetransmissionofcovid19fromhighlyexposedindividualsinpublictransportation AT andradejoses tracingcontactstoevaluatethetransmissionofcovid19fromhighlyexposedindividualsinpublictransportation AT furtadovasco tracingcontactstoevaluatethetransmissionofcovid19fromhighlyexposedindividualsinpublictransportation |