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Leveraging National Claims and Hospital Big Data: Cohort Study on a Statin-Drug Interaction Use Case
BACKGROUND: Linking different sources of medical data is a promising approach to analyze care trajectories. The aim of the INSHARE (Integrating and Sharing Health Big Data for Research) project was to provide the blueprint for a technological platform that facilitates integration, sharing, and reuse...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
JMIR Publications
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8713098/ https://www.ncbi.nlm.nih.gov/pubmed/34898457 http://dx.doi.org/10.2196/29286 |
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author | Bannay, Aurélie Bories, Mathilde Le Corre, Pascal Riou, Christine Lemordant, Pierre Van Hille, Pascal Chazard, Emmanuel Dode, Xavier Cuggia, Marc Bouzillé, Guillaume |
author_facet | Bannay, Aurélie Bories, Mathilde Le Corre, Pascal Riou, Christine Lemordant, Pierre Van Hille, Pascal Chazard, Emmanuel Dode, Xavier Cuggia, Marc Bouzillé, Guillaume |
author_sort | Bannay, Aurélie |
collection | PubMed |
description | BACKGROUND: Linking different sources of medical data is a promising approach to analyze care trajectories. The aim of the INSHARE (Integrating and Sharing Health Big Data for Research) project was to provide the blueprint for a technological platform that facilitates integration, sharing, and reuse of data from 2 sources: the clinical data warehouse (CDW) of the Rennes academic hospital, called eHOP (entrepôt Hôpital), and a data set extracted from the French national claim data warehouse (Système National des Données de Santé [SNDS]). OBJECTIVE: This study aims to demonstrate how the INSHARE platform can support big data analytic tasks in the health field using a pharmacovigilance use case based on statin consumption and statin-drug interactions. METHODS: A Spark distributed cluster-computing framework was used for the record linkage procedure and all analyses. A semideterministic record linkage method based on the common variables between the chosen data sources was developed to identify all patients discharged after at least one hospital stay at the Rennes academic hospital between 2015 and 2017. The use-case study focused on a cohort of patients treated with statins prescribed by their general practitioner or during their hospital stay. RESULTS: The whole process (record linkage procedure and use-case analyses) required 88 minutes. Of the 161,532 and 164,316 patients from the SNDS and eHOP CDW data sets, respectively, 159,495 patients were successfully linked (98.74% and 97.07% of patients from SNDS and eHOP CDW, respectively). Of the 16,806 patients with at least one statin delivery, 8293 patients started the consumption before and continued during the hospital stay, 6382 patients stopped statin consumption at hospital admission, and 2131 patients initiated statins in hospital. Statin-drug interactions occurred more frequently during hospitalization than in the community (3800/10,424, 36.45% and 3253/14,675, 22.17%, respectively; P<.001). Only 121 patients had the most severe level of statin-drug interaction. Hospital stay burden (length of stay and in-hospital mortality) was more severe in patients with statin-drug interactions during hospitalization. CONCLUSIONS: This study demonstrates the added value of combining and reusing clinical and claim data to provide large-scale measures of drug-drug interaction prevalence and care pathways outside hospitals. It builds a path to move the current health care system toward a Learning Health System using knowledge generated from research on real-world health data. |
format | Online Article Text |
id | pubmed-8713098 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | JMIR Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-87130982022-01-14 Leveraging National Claims and Hospital Big Data: Cohort Study on a Statin-Drug Interaction Use Case Bannay, Aurélie Bories, Mathilde Le Corre, Pascal Riou, Christine Lemordant, Pierre Van Hille, Pascal Chazard, Emmanuel Dode, Xavier Cuggia, Marc Bouzillé, Guillaume JMIR Med Inform Original Paper BACKGROUND: Linking different sources of medical data is a promising approach to analyze care trajectories. The aim of the INSHARE (Integrating and Sharing Health Big Data for Research) project was to provide the blueprint for a technological platform that facilitates integration, sharing, and reuse of data from 2 sources: the clinical data warehouse (CDW) of the Rennes academic hospital, called eHOP (entrepôt Hôpital), and a data set extracted from the French national claim data warehouse (Système National des Données de Santé [SNDS]). OBJECTIVE: This study aims to demonstrate how the INSHARE platform can support big data analytic tasks in the health field using a pharmacovigilance use case based on statin consumption and statin-drug interactions. METHODS: A Spark distributed cluster-computing framework was used for the record linkage procedure and all analyses. A semideterministic record linkage method based on the common variables between the chosen data sources was developed to identify all patients discharged after at least one hospital stay at the Rennes academic hospital between 2015 and 2017. The use-case study focused on a cohort of patients treated with statins prescribed by their general practitioner or during their hospital stay. RESULTS: The whole process (record linkage procedure and use-case analyses) required 88 minutes. Of the 161,532 and 164,316 patients from the SNDS and eHOP CDW data sets, respectively, 159,495 patients were successfully linked (98.74% and 97.07% of patients from SNDS and eHOP CDW, respectively). Of the 16,806 patients with at least one statin delivery, 8293 patients started the consumption before and continued during the hospital stay, 6382 patients stopped statin consumption at hospital admission, and 2131 patients initiated statins in hospital. Statin-drug interactions occurred more frequently during hospitalization than in the community (3800/10,424, 36.45% and 3253/14,675, 22.17%, respectively; P<.001). Only 121 patients had the most severe level of statin-drug interaction. Hospital stay burden (length of stay and in-hospital mortality) was more severe in patients with statin-drug interactions during hospitalization. CONCLUSIONS: This study demonstrates the added value of combining and reusing clinical and claim data to provide large-scale measures of drug-drug interaction prevalence and care pathways outside hospitals. It builds a path to move the current health care system toward a Learning Health System using knowledge generated from research on real-world health data. JMIR Publications 2021-12-13 /pmc/articles/PMC8713098/ /pubmed/34898457 http://dx.doi.org/10.2196/29286 Text en ©Aurélie Bannay, Mathilde Bories, Pascal Le Corre, Christine Riou, Pierre Lemordant, Pascal Van Hille, Emmanuel Chazard, Xavier Dode, Marc Cuggia, Guillaume Bouzillé. Originally published in JMIR Medical Informatics (https://medinform.jmir.org), 13.12.2021. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on https://medinform.jmir.org/, as well as this copyright and license information must be included. |
spellingShingle | Original Paper Bannay, Aurélie Bories, Mathilde Le Corre, Pascal Riou, Christine Lemordant, Pierre Van Hille, Pascal Chazard, Emmanuel Dode, Xavier Cuggia, Marc Bouzillé, Guillaume Leveraging National Claims and Hospital Big Data: Cohort Study on a Statin-Drug Interaction Use Case |
title | Leveraging National Claims and Hospital Big Data: Cohort Study on a Statin-Drug Interaction Use Case |
title_full | Leveraging National Claims and Hospital Big Data: Cohort Study on a Statin-Drug Interaction Use Case |
title_fullStr | Leveraging National Claims and Hospital Big Data: Cohort Study on a Statin-Drug Interaction Use Case |
title_full_unstemmed | Leveraging National Claims and Hospital Big Data: Cohort Study on a Statin-Drug Interaction Use Case |
title_short | Leveraging National Claims and Hospital Big Data: Cohort Study on a Statin-Drug Interaction Use Case |
title_sort | leveraging national claims and hospital big data: cohort study on a statin-drug interaction use case |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8713098/ https://www.ncbi.nlm.nih.gov/pubmed/34898457 http://dx.doi.org/10.2196/29286 |
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