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Can auxiliary indicators improve COVID-19 forecasting and hotspot prediction?
Short-term forecasts of traditional streams from public health reporting (such as cases, hospitalizations, and deaths) are a key input to public health decision-making during a pandemic. Since early 2020, our research group has worked with data partners to collect, curate, and make publicly availabl...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8713796/ https://www.ncbi.nlm.nih.gov/pubmed/34903655 http://dx.doi.org/10.1073/pnas.2111453118 |
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author | McDonald, Daniel J. Bien, Jacob Green, Alden Hu, Addison J. DeFries, Nat Hyun, Sangwon Oliveira, Natalia L. Sharpnack, James Tang, Jingjing Tibshirani, Robert Ventura, Valérie Wasserman, Larry Tibshirani, Ryan J. |
author_facet | McDonald, Daniel J. Bien, Jacob Green, Alden Hu, Addison J. DeFries, Nat Hyun, Sangwon Oliveira, Natalia L. Sharpnack, James Tang, Jingjing Tibshirani, Robert Ventura, Valérie Wasserman, Larry Tibshirani, Ryan J. |
author_sort | McDonald, Daniel J. |
collection | PubMed |
description | Short-term forecasts of traditional streams from public health reporting (such as cases, hospitalizations, and deaths) are a key input to public health decision-making during a pandemic. Since early 2020, our research group has worked with data partners to collect, curate, and make publicly available numerous real-time COVID-19 indicators, providing multiple views of pandemic activity in the United States. This paper studies the utility of five such indicators—derived from deidentified medical insurance claims, self-reported symptoms from online surveys, and COVID-related Google search activity—from a forecasting perspective. For each indicator, we ask whether its inclusion in an autoregressive (AR) model leads to improved predictive accuracy relative to the same model excluding it. Such an AR model, without external features, is already competitive with many top COVID-19 forecasting models in use today. Our analysis reveals that 1) inclusion of each of these five indicators improves on the overall predictive accuracy of the AR model; 2) predictive gains are in general most pronounced during times in which COVID cases are trending in “flat” or “down” directions; and 3) one indicator, based on Google searches, seems to be particularly helpful during “up” trends. |
format | Online Article Text |
id | pubmed-8713796 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-87137962022-01-21 Can auxiliary indicators improve COVID-19 forecasting and hotspot prediction? McDonald, Daniel J. Bien, Jacob Green, Alden Hu, Addison J. DeFries, Nat Hyun, Sangwon Oliveira, Natalia L. Sharpnack, James Tang, Jingjing Tibshirani, Robert Ventura, Valérie Wasserman, Larry Tibshirani, Ryan J. Proc Natl Acad Sci U S A Physical Sciences Short-term forecasts of traditional streams from public health reporting (such as cases, hospitalizations, and deaths) are a key input to public health decision-making during a pandemic. Since early 2020, our research group has worked with data partners to collect, curate, and make publicly available numerous real-time COVID-19 indicators, providing multiple views of pandemic activity in the United States. This paper studies the utility of five such indicators—derived from deidentified medical insurance claims, self-reported symptoms from online surveys, and COVID-related Google search activity—from a forecasting perspective. For each indicator, we ask whether its inclusion in an autoregressive (AR) model leads to improved predictive accuracy relative to the same model excluding it. Such an AR model, without external features, is already competitive with many top COVID-19 forecasting models in use today. Our analysis reveals that 1) inclusion of each of these five indicators improves on the overall predictive accuracy of the AR model; 2) predictive gains are in general most pronounced during times in which COVID cases are trending in “flat” or “down” directions; and 3) one indicator, based on Google searches, seems to be particularly helpful during “up” trends. National Academy of Sciences 2021-12-13 2021-12-21 /pmc/articles/PMC8713796/ /pubmed/34903655 http://dx.doi.org/10.1073/pnas.2111453118 Text en Copyright © 2021 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by/4.0/This open access article is distributed under Creative Commons Attribution License 4.0 (CC BY) (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Physical Sciences McDonald, Daniel J. Bien, Jacob Green, Alden Hu, Addison J. DeFries, Nat Hyun, Sangwon Oliveira, Natalia L. Sharpnack, James Tang, Jingjing Tibshirani, Robert Ventura, Valérie Wasserman, Larry Tibshirani, Ryan J. Can auxiliary indicators improve COVID-19 forecasting and hotspot prediction? |
title | Can auxiliary indicators improve COVID-19 forecasting and hotspot prediction? |
title_full | Can auxiliary indicators improve COVID-19 forecasting and hotspot prediction? |
title_fullStr | Can auxiliary indicators improve COVID-19 forecasting and hotspot prediction? |
title_full_unstemmed | Can auxiliary indicators improve COVID-19 forecasting and hotspot prediction? |
title_short | Can auxiliary indicators improve COVID-19 forecasting and hotspot prediction? |
title_sort | can auxiliary indicators improve covid-19 forecasting and hotspot prediction? |
topic | Physical Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8713796/ https://www.ncbi.nlm.nih.gov/pubmed/34903655 http://dx.doi.org/10.1073/pnas.2111453118 |
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