Cargando…
Performance of bovine genital campylobacteriosis diagnostic tests in bulls from Uruguay: a Bayesian latent class model approach
The sensitivity (Se) and specificity (Sp) of three diagnostic tests for the detection of Campylobacter fetus venerealis (Cfv) using field samples were estimated using a Bayesian latent class model (BLCM), accounting for the absence of a gold standard. The tests included in this study were direct imm...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Netherlands
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8716329/ https://www.ncbi.nlm.nih.gov/pubmed/34966976 http://dx.doi.org/10.1007/s11250-021-03039-w |
_version_ | 1784624300963135488 |
---|---|
author | Mederos, America Galarraga, Denise van der Graaf-van Bloois, Linda Buczinski, Sébastien |
author_facet | Mederos, America Galarraga, Denise van der Graaf-van Bloois, Linda Buczinski, Sébastien |
author_sort | Mederos, America |
collection | PubMed |
description | The sensitivity (Se) and specificity (Sp) of three diagnostic tests for the detection of Campylobacter fetus venerealis (Cfv) using field samples were estimated using a Bayesian latent class model (BLCM), accounting for the absence of a gold standard. The tests included in this study were direct immunofluorescence antibody test (IFAT), polymerase chain reaction (PCR), and real-time PCR (RT-PCR). Twelve farms from two different populations were selected and bull prepuce samples were collected. The IFAT was performed according to the OIE Manual. The conventional PCR was performed as multiplex, targeting the gene nahE for C. fetus species identification and insertion element ISCfe1 for Cfv identification. The RT-PCR was performed as uniplex: one targeting the gene nahE for C. fetus and the other targeting the insertion ISCfe1 (ISC2) for Cfv. Results from the BLCM showed a median Se of 11.7% (Bayesian credibility interval (BCI): 1.93–29.79%), 53.7% (BCI: 23.1–95.0%), and 36.1% (BCI: 14.5–71.7%) for IFAT, PCR, and RT-PCR respectively. The Sp were 94.5% (BCI: 90.1–97.9%), 97.0% (BCI: 92.9–99.3%), and 98.4% (BCI: 95.3–99.7%) for IFAT, PCR, and RT-PCR respectively. The correlation between PCR and RT-PCR was positive and low in samples from both sampled population (0.63% vs 8.47%). These results suggest that diagnostic sensitivity of the studied tests is lower using field samples than using pure Cfv strains. |
format | Online Article Text |
id | pubmed-8716329 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-87163292021-12-30 Performance of bovine genital campylobacteriosis diagnostic tests in bulls from Uruguay: a Bayesian latent class model approach Mederos, America Galarraga, Denise van der Graaf-van Bloois, Linda Buczinski, Sébastien Trop Anim Health Prod Regular Articles The sensitivity (Se) and specificity (Sp) of three diagnostic tests for the detection of Campylobacter fetus venerealis (Cfv) using field samples were estimated using a Bayesian latent class model (BLCM), accounting for the absence of a gold standard. The tests included in this study were direct immunofluorescence antibody test (IFAT), polymerase chain reaction (PCR), and real-time PCR (RT-PCR). Twelve farms from two different populations were selected and bull prepuce samples were collected. The IFAT was performed according to the OIE Manual. The conventional PCR was performed as multiplex, targeting the gene nahE for C. fetus species identification and insertion element ISCfe1 for Cfv identification. The RT-PCR was performed as uniplex: one targeting the gene nahE for C. fetus and the other targeting the insertion ISCfe1 (ISC2) for Cfv. Results from the BLCM showed a median Se of 11.7% (Bayesian credibility interval (BCI): 1.93–29.79%), 53.7% (BCI: 23.1–95.0%), and 36.1% (BCI: 14.5–71.7%) for IFAT, PCR, and RT-PCR respectively. The Sp were 94.5% (BCI: 90.1–97.9%), 97.0% (BCI: 92.9–99.3%), and 98.4% (BCI: 95.3–99.7%) for IFAT, PCR, and RT-PCR respectively. The correlation between PCR and RT-PCR was positive and low in samples from both sampled population (0.63% vs 8.47%). These results suggest that diagnostic sensitivity of the studied tests is lower using field samples than using pure Cfv strains. Springer Netherlands 2021-12-30 2022 /pmc/articles/PMC8716329/ /pubmed/34966976 http://dx.doi.org/10.1007/s11250-021-03039-w Text en © The Author(s), under exclusive licence to Springer Nature B.V. 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Regular Articles Mederos, America Galarraga, Denise van der Graaf-van Bloois, Linda Buczinski, Sébastien Performance of bovine genital campylobacteriosis diagnostic tests in bulls from Uruguay: a Bayesian latent class model approach |
title | Performance of bovine genital campylobacteriosis diagnostic tests in bulls from Uruguay: a Bayesian latent class model approach |
title_full | Performance of bovine genital campylobacteriosis diagnostic tests in bulls from Uruguay: a Bayesian latent class model approach |
title_fullStr | Performance of bovine genital campylobacteriosis diagnostic tests in bulls from Uruguay: a Bayesian latent class model approach |
title_full_unstemmed | Performance of bovine genital campylobacteriosis diagnostic tests in bulls from Uruguay: a Bayesian latent class model approach |
title_short | Performance of bovine genital campylobacteriosis diagnostic tests in bulls from Uruguay: a Bayesian latent class model approach |
title_sort | performance of bovine genital campylobacteriosis diagnostic tests in bulls from uruguay: a bayesian latent class model approach |
topic | Regular Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8716329/ https://www.ncbi.nlm.nih.gov/pubmed/34966976 http://dx.doi.org/10.1007/s11250-021-03039-w |
work_keys_str_mv | AT mederosamerica performanceofbovinegenitalcampylobacteriosisdiagnostictestsinbullsfromuruguayabayesianlatentclassmodelapproach AT galarragadenise performanceofbovinegenitalcampylobacteriosisdiagnostictestsinbullsfromuruguayabayesianlatentclassmodelapproach AT vandergraafvanblooislinda performanceofbovinegenitalcampylobacteriosisdiagnostictestsinbullsfromuruguayabayesianlatentclassmodelapproach AT buczinskisebastien performanceofbovinegenitalcampylobacteriosisdiagnostictestsinbullsfromuruguayabayesianlatentclassmodelapproach |