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Dataset for dynamics and conformational changes in human NEIL2 protein analyzed by integrative structural biology approach
This work presents new data on human endonuclease VIII-like 2 protein (hNEIL2), a part of DNA glycosylases of the helix–two-turn–helix structural superfamily. While X-ray structure of oNEIL2 (opossum Monodelphis) was resolved partially [1], the structure of hNEIL2 has not yet been determined. This d...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8717250/ https://www.ncbi.nlm.nih.gov/pubmed/35005149 http://dx.doi.org/10.1016/j.dib.2021.107760 |
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author | Zhdanova, Polina V. Ishchenko, Alexander A. Chernonosov, Alexander A. Zharkov, Dmitry O. Koval, Vladimir V. |
author_facet | Zhdanova, Polina V. Ishchenko, Alexander A. Chernonosov, Alexander A. Zharkov, Dmitry O. Koval, Vladimir V. |
author_sort | Zhdanova, Polina V. |
collection | PubMed |
description | This work presents new data on human endonuclease VIII-like 2 protein (hNEIL2), a part of DNA glycosylases of the helix–two-turn–helix structural superfamily. While X-ray structure of oNEIL2 (opossum Monodelphis) was resolved partially [1], the structure of hNEIL2 has not yet been determined. This data article describes a powerful combination of hydrogen-deuterium exchange mass spectrometry, homology modeling, and molecular dynamics simulations for protein conformational dynamics analysis. The data supplied in this work are related to the research article entitled “Dynamics and Conformational Changes in Human NEIL2 DNA Glycosylase Analyzed by Hydrogen/Deuterium Exchange Mass Spectrometry”. |
format | Online Article Text |
id | pubmed-8717250 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-87172502022-01-06 Dataset for dynamics and conformational changes in human NEIL2 protein analyzed by integrative structural biology approach Zhdanova, Polina V. Ishchenko, Alexander A. Chernonosov, Alexander A. Zharkov, Dmitry O. Koval, Vladimir V. Data Brief Data Article This work presents new data on human endonuclease VIII-like 2 protein (hNEIL2), a part of DNA glycosylases of the helix–two-turn–helix structural superfamily. While X-ray structure of oNEIL2 (opossum Monodelphis) was resolved partially [1], the structure of hNEIL2 has not yet been determined. This data article describes a powerful combination of hydrogen-deuterium exchange mass spectrometry, homology modeling, and molecular dynamics simulations for protein conformational dynamics analysis. The data supplied in this work are related to the research article entitled “Dynamics and Conformational Changes in Human NEIL2 DNA Glycosylase Analyzed by Hydrogen/Deuterium Exchange Mass Spectrometry”. Elsevier 2021-12-25 /pmc/articles/PMC8717250/ /pubmed/35005149 http://dx.doi.org/10.1016/j.dib.2021.107760 Text en © 2021 The Author(s). Published by Elsevier Inc. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Data Article Zhdanova, Polina V. Ishchenko, Alexander A. Chernonosov, Alexander A. Zharkov, Dmitry O. Koval, Vladimir V. Dataset for dynamics and conformational changes in human NEIL2 protein analyzed by integrative structural biology approach |
title | Dataset for dynamics and conformational changes in human NEIL2 protein analyzed by integrative structural biology approach |
title_full | Dataset for dynamics and conformational changes in human NEIL2 protein analyzed by integrative structural biology approach |
title_fullStr | Dataset for dynamics and conformational changes in human NEIL2 protein analyzed by integrative structural biology approach |
title_full_unstemmed | Dataset for dynamics and conformational changes in human NEIL2 protein analyzed by integrative structural biology approach |
title_short | Dataset for dynamics and conformational changes in human NEIL2 protein analyzed by integrative structural biology approach |
title_sort | dataset for dynamics and conformational changes in human neil2 protein analyzed by integrative structural biology approach |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8717250/ https://www.ncbi.nlm.nih.gov/pubmed/35005149 http://dx.doi.org/10.1016/j.dib.2021.107760 |
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