Cargando…

COVIDXception-Net: A Bayesian Optimization-Based Deep Learning Approach to Diagnose COVID-19 from X-Ray Images

COVID-19 is spreading around the world like wildfire. Chest X-rays are used as one of the primary tools for diagnosing COVID-19. However, about two-thirds of the world population do not have access to sufficient radiological services. In this work, we propose a deep learning-driven automated system,...

Descripción completa

Detalles Bibliográficos
Autores principales: Arman, Shifat E., Rahman, Sejuti, Deowan, Shamim Ahmed
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Singapore 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8717305/
https://www.ncbi.nlm.nih.gov/pubmed/34981040
http://dx.doi.org/10.1007/s42979-021-00980-3
_version_ 1784624502974447616
author Arman, Shifat E.
Rahman, Sejuti
Deowan, Shamim Ahmed
author_facet Arman, Shifat E.
Rahman, Sejuti
Deowan, Shamim Ahmed
author_sort Arman, Shifat E.
collection PubMed
description COVID-19 is spreading around the world like wildfire. Chest X-rays are used as one of the primary tools for diagnosing COVID-19. However, about two-thirds of the world population do not have access to sufficient radiological services. In this work, we propose a deep learning-driven automated system, COVIDXception-Net, for diagnosing COVID-19 from chest X-rays. A primary challenge in any data-driven COVID-19 detection is the scarcity of COVID-19 data, which heavily deteriorates a deep learning model’s performance. To address this issue, we incorporate a weighted-loss function that ensures the COVID-19 cases are given more importance during the training process. We also propose using Bayesian Optimization to find the best architecture for detecting COVID-19. Extensive experimentation on four publicly available COVID-19 datasets shows that our proposed model achieves an accuracy of 0.94, precision 0.95, recall 0.94, specificity 0.997, F1-score 0.94, and Matthews correlation coefficient 0.992 outperforming three widely used architectures—VGG16, MobileNetV2, and InceptionV3. It also surpasses the performance of several state-of-the-art COVID-19 detection methods. We also performed two ablation studies that show our model’s accuracy degrades from 0.994 to 0.950 when a random search is used and to 0.983 when a regular loss function is employed instead of the Bayesian and weighted loss, respectively.
format Online
Article
Text
id pubmed-8717305
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Springer Singapore
record_format MEDLINE/PubMed
spelling pubmed-87173052021-12-30 COVIDXception-Net: A Bayesian Optimization-Based Deep Learning Approach to Diagnose COVID-19 from X-Ray Images Arman, Shifat E. Rahman, Sejuti Deowan, Shamim Ahmed SN Comput Sci Original Research COVID-19 is spreading around the world like wildfire. Chest X-rays are used as one of the primary tools for diagnosing COVID-19. However, about two-thirds of the world population do not have access to sufficient radiological services. In this work, we propose a deep learning-driven automated system, COVIDXception-Net, for diagnosing COVID-19 from chest X-rays. A primary challenge in any data-driven COVID-19 detection is the scarcity of COVID-19 data, which heavily deteriorates a deep learning model’s performance. To address this issue, we incorporate a weighted-loss function that ensures the COVID-19 cases are given more importance during the training process. We also propose using Bayesian Optimization to find the best architecture for detecting COVID-19. Extensive experimentation on four publicly available COVID-19 datasets shows that our proposed model achieves an accuracy of 0.94, precision 0.95, recall 0.94, specificity 0.997, F1-score 0.94, and Matthews correlation coefficient 0.992 outperforming three widely used architectures—VGG16, MobileNetV2, and InceptionV3. It also surpasses the performance of several state-of-the-art COVID-19 detection methods. We also performed two ablation studies that show our model’s accuracy degrades from 0.994 to 0.950 when a random search is used and to 0.983 when a regular loss function is employed instead of the Bayesian and weighted loss, respectively. Springer Singapore 2021-12-30 2022 /pmc/articles/PMC8717305/ /pubmed/34981040 http://dx.doi.org/10.1007/s42979-021-00980-3 Text en © The Author(s), under exclusive licence to Springer Nature Singapore Pte Ltd 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Research
Arman, Shifat E.
Rahman, Sejuti
Deowan, Shamim Ahmed
COVIDXception-Net: A Bayesian Optimization-Based Deep Learning Approach to Diagnose COVID-19 from X-Ray Images
title COVIDXception-Net: A Bayesian Optimization-Based Deep Learning Approach to Diagnose COVID-19 from X-Ray Images
title_full COVIDXception-Net: A Bayesian Optimization-Based Deep Learning Approach to Diagnose COVID-19 from X-Ray Images
title_fullStr COVIDXception-Net: A Bayesian Optimization-Based Deep Learning Approach to Diagnose COVID-19 from X-Ray Images
title_full_unstemmed COVIDXception-Net: A Bayesian Optimization-Based Deep Learning Approach to Diagnose COVID-19 from X-Ray Images
title_short COVIDXception-Net: A Bayesian Optimization-Based Deep Learning Approach to Diagnose COVID-19 from X-Ray Images
title_sort covidxception-net: a bayesian optimization-based deep learning approach to diagnose covid-19 from x-ray images
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8717305/
https://www.ncbi.nlm.nih.gov/pubmed/34981040
http://dx.doi.org/10.1007/s42979-021-00980-3
work_keys_str_mv AT armanshifate covidxceptionnetabayesianoptimizationbaseddeeplearningapproachtodiagnosecovid19fromxrayimages
AT rahmansejuti covidxceptionnetabayesianoptimizationbaseddeeplearningapproachtodiagnosecovid19fromxrayimages
AT deowanshamimahmed covidxceptionnetabayesianoptimizationbaseddeeplearningapproachtodiagnosecovid19fromxrayimages